Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RPS3AP25-201ENST00000411660 793 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 CASKP1-201ENST00000412870 582 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AC115285.1-201ENST00000424879 736 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AC011742.1-201ENST00000431448 434 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.7□□□□□ -1.82
FREM3P0C091 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.7□□□□□ -1.82
FREM3P0C091 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 PPM1AP1-201ENST00000502740 1135 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 AC091516.1-201ENST00000549191 703 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.7□□□□□ -1.82
FREM3P0C091 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.7□□□□□ -1.82
FREM3P0C091 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.7□□□□□ -1.82
FREM3P0C091 CASC19-255ENST00000641733 1385 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 MFSD8-242ENST00000641690 4199 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
FREM3P0C091 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.7□□□□□ -1.82
FREM3P0C091 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 MARK2P15-201ENST00000432204 2186 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
FREM3P0C091 RN7SKP280-201ENST00000364196 304 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AC233289.1-201ENST00000403700 508 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 RRM2P4-201ENST00000441721 562 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AC090589.1-201ENST00000473109 362 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 RPL21P129-201ENST00000491732 478 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 RPL31P61-201ENST00000496160 376 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 AP003730.1-201ENST00000524605 285 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.7□□□□□ -1.82
FREM3P0C091 GTF2IP22-201ENST00000554443 182 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 AC005255.1-201ENST00000593748 216 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 MIR6875-201ENST00000617506 72 ntBASIC3.7□□□□□ -1.82
FREM3P0C091 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FREM3P0C091 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
FREM3P0C091 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
FREM3P0C091 ASNSP1-204ENST00000641977 1664 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
FREM3P0C091 AC116158.1-201ENST00000560231 2129 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
FREM3P0C091 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.69□□□□□ -1.82
FREM3P0C091 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.69□□□□□ -1.82
FREM3P0C091 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.69□□□□□ -1.82
FREM3P0C091 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 RNU1-132P-201ENST00000364300 164 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 RNA5SP130-201ENST00000364431 114 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 RPL17P50-201ENST00000396131 546 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 RBMY1KP-201ENST00000423480 476 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 TRGV7-201ENST00000427089 353 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 RANP8-201ENST00000444720 713 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.69□□□□□ -1.82
FREM3P0C091 RNA5SP360-201ENST00000516555 118 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.69□□□□□ -1.82
FREM3P0C091 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.69□□□□□ -1.82
FREM3P0C091 MED28P5-201ENST00000528254 438 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.69□□□□□ -1.82
FREM3P0C091 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.69□□□□□ -1.82
FREM3P0C091 AC053481.4-201ENST00000583164 216 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 AC090948.2-201ENST00000607363 564 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 AP005264.7-201ENST00000625003 745 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 HSPD1P11-201ENST00000508643 1702 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 AC027228.2-201ENST00000567141 2154 ntBASIC3.69□□□□□ -1.82
FREM3P0C091 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
FREM3P0C091 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
FREM3P0C091 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.69□□□□□ -1.82
FREM3P0C091 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FREM3P0C091 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
FREM3P0C091 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
FREM3P0C091 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
FREM3P0C091 RNA5SP388-201ENST00000362584 119 ntBASIC3.68□□□□□ -1.82
FREM3P0C091 RCC2P2-201ENST00000422174 918 ntBASIC3.68□□□□□ -1.82
FREM3P0C091 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.68□□□□□ -1.82
FREM3P0C091 YWHAEP5-201ENST00000431545 765 ntBASIC3.68□□□□□ -1.82
FREM3P0C091 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms