Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM1P09493 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 AL034403.1-201ENST00000399414 885 ntBASIC4.67□□□□□ -1.66
TPM1P09493 AC093698.1-201ENST00000423843 571 ntBASIC4.67□□□□□ -1.66
TPM1P09493 DPY19L1P2-201ENST00000426647 915 ntBASIC4.67□□□□□ -1.66
TPM1P09493 CACYBPP1-201ENST00000438592 684 ntBASIC4.67□□□□□ -1.66
TPM1P09493 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM1P09493 PPIAP20-201ENST00000449839 135 ntBASIC4.67□□□□□ -1.66
TPM1P09493 CALM1P2-201ENST00000452941 448 ntBASIC4.67□□□□□ -1.66
TPM1P09493 LARP7P4-201ENST00000481075 878 ntBASIC4.67□□□□□ -1.66
TPM1P09493 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.67□□□□□ -1.66
TPM1P09493 AC010374.1-201ENST00000503762 1237 ntBASIC4.67□□□□□ -1.66
TPM1P09493 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM1P09493 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM1P09493 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.67□□□□□ -1.66
TPM1P09493 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.67□□□□□ -1.66
TPM1P09493 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM1P09493 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 MIR4646-201ENST00000580775 63 ntBASIC4.67□□□□□ -1.66
TPM1P09493 AC069061.3-201ENST00000582254 823 ntBASIC4.67□□□□□ -1.66
TPM1P09493 MIR4310-201ENST00000582950 57 ntBASIC4.67□□□□□ -1.66
TPM1P09493 AC015911.5-201ENST00000587076 451 ntBASIC4.67□□□□□ -1.66
TPM1P09493 AP001160.4-201ENST00000596971 382 ntBASIC4.67□□□□□ -1.66
TPM1P09493 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.67□□□□□ -1.66
TPM1P09493 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.67□□□□□ -1.66
TPM1P09493 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
TPM1P09493 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TPM1P09493 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TPM1P09493 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TPM1P09493 AL133412.1-201ENST00000380194 2992 ntBASIC4.66□□□□□ -1.66
TPM1P09493 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.66□□□□□ -1.66
TPM1P09493 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.66□□□□□ -1.66
TPM1P09493 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TPM1P09493 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TPM1P09493 RNU6-304P-201ENST00000364855 107 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC097374.1-203ENST00000400783 485 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AL034374.1-201ENST00000406329 351 ntBASIC4.66□□□□□ -1.66
TPM1P09493 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.66□□□□□ -1.66
TPM1P09493 NDUFA5P1-201ENST00000433858 341 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AF228730.2-201ENST00000438784 848 ntBASIC4.66□□□□□ -1.66
TPM1P09493 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.66□□□□□ -1.66
TPM1P09493 AC053481.1-201ENST00000467217 306 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
TPM1P09493 AC106872.2-201ENST00000494303 480 ntBASIC4.66□□□□□ -1.66
TPM1P09493 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.66□□□□□ -1.66
TPM1P09493 RFPL1S-203ENST00000539579 330 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC087888.1-201ENST00000550884 1254 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC063950.1-201ENST00000552036 308 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC027176.2-201ENST00000559166 746 ntBASIC4.66□□□□□ -1.66
TPM1P09493 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.66□□□□□ -1.66
TPM1P09493 MIR3934-201ENST00000579806 107 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC110741.2-201ENST00000605278 268 ntBASIC4.66□□□□□ -1.66
TPM1P09493 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.66□□□□□ -1.66
TPM1P09493 AP003392.5-201ENST00000607857 415 ntBASIC4.66□□□□□ -1.66
TPM1P09493 RN7SL722P-201ENST00000617780 284 ntBASIC4.66□□□□□ -1.66
TPM1P09493 RN7SL565P-201ENST00000618246 284 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC068870.2-201ENST00000620635 389 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC000123.2-201ENST00000623124 461 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AL049536.1-201ENST00000625043 744 ntBASIC4.66□□□□□ -1.66
TPM1P09493 AC134882.1-201ENST00000603738 1676 ntBASIC4.66□□□□□ -1.66
TPM1P09493 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TPM1P09493 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TPM1P09493 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TPM1P09493 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TPM1P09493 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
TPM1P09493 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TPM1P09493 AL138878.1-201ENST00000405131 347 ntBASIC4.65□□□□□ -1.67
TPM1P09493 AP000357.1-201ENST00000409926 1165 ntBASIC4.65□□□□□ -1.67
TPM1P09493 GTF3AP1-201ENST00000416942 1004 ntBASIC4.65□□□□□ -1.67
TPM1P09493 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.65□□□□□ -1.67
TPM1P09493 USP12PY-201ENST00000427677 1064 ntBASIC4.65□□□□□ -1.67
TPM1P09493 MTCO3P21-201ENST00000430791 643 ntBASIC4.65□□□□□ -1.67
TPM1P09493 NFYAP1-201ENST00000431953 972 ntBASIC4.65□□□□□ -1.67
TPM1P09493 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.65□□□□□ -1.67
TPM1P09493 YWHAQP9-201ENST00000445891 512 ntBASIC4.65□□□□□ -1.67
TPM1P09493 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.65□□□□□ -1.67
TPM1P09493 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.65□□□□□ -1.67
TPM1P09493 RNU6-1218P-201ENST00000458990 108 ntBASIC4.65□□□□□ -1.67
TPM1P09493 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.65□□□□□ -1.67
TPM1P09493 AC022336.1-201ENST00000475510 337 ntBASIC4.65□□□□□ -1.67
TPM1P09493 AC069499.1-201ENST00000489433 509 ntBASIC4.65□□□□□ -1.67
TPM1P09493 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.65□□□□□ -1.67
TPM1P09493 AC010627.1-201ENST00000503819 1294 ntBASIC4.65□□□□□ -1.67
TPM1P09493 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.65□□□□□ -1.67
TPM1P09493 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TPM1P09493 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.65□□□□□ -1.67
TPM1P09493 SMARCE1P4-201ENST00000523647 241 ntBASIC4.65□□□□□ -1.67
TPM1P09493 AC141257.3-201ENST00000572906 215 ntBASIC4.65□□□□□ -1.67
TPM1P09493 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TPM1P09493 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TPM1P09493 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.65□□□□□ -1.67
TPM1P09493 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
TPM1P09493 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TPM1P09493 AC092162.3-201ENST00000624511 1624 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms