Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.46□□□□□ -1.7
CLPTM1O96005 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 SNORD74.4-201ENST00000364129 80 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 RNU6-146P-201ENST00000384602 108 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLPTM1O96005 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.46□□□□□ -1.7
CLPTM1O96005 RPS4XP16-201ENST00000427198 791 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 USP12PY-201ENST00000427677 1064 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.46□□□□□ -1.7
CLPTM1O96005 PA2G4P6-201ENST00000438325 1197 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AL121877.1-201ENST00000453704 622 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC104164.3-201ENST00000467363 1258 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 RPL21P18-201ENST00000469899 480 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.46□□□□□ -1.7
CLPTM1O96005 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 BX284632.1-201ENST00000478218 541 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.46□□□□□ -1.7
CLPTM1O96005 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.46□□□□□ -1.7
CLPTM1O96005 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 UBE2V1P12-201ENST00000503954 474 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC069306.1-201ENST00000507006 843 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC133963.2-201ENST00000513686 578 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC008694.2-201ENST00000517591 306 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.46□□□□□ -1.7
CLPTM1O96005 DEFB109D-201ENST00000529497 240 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.46□□□□□ -1.7
CLPTM1O96005 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC104229.1-201ENST00000561364 255 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC209154.1-201ENST00000582156 337 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC021851.1-201ENST00000608537 1082 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AL121612.2-201ENST00000612261 482 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC126544.2-201ENST00000625174 749 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC006927.4-201ENST00000639187 543 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CLPTM1O96005 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.46□□□□□ -1.7
CLPTM1O96005 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CLPTM1O96005 AC016588.2-201ENST00000632484 3021 ntBASIC4.46□□□□□ -1.7
CLPTM1O96005 AC022893.2-201ENST00000564832 3296 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CLPTM1O96005 MTND5P11-201ENST00000511037 1812 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLPTM1O96005 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLPTM1O96005 RNU1-106P-201ENST00000384382 164 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AL034403.1-201ENST00000399414 885 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 U3.36-201ENST00000408418 213 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 RNU6-603P-201ENST00000411403 107 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AL450992.3-201ENST00000413192 568 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.45□□□□□ -1.7
CLPTM1O96005 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLPTM1O96005 RPL12P34-201ENST00000424532 479 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.45□□□□□ -1.7
CLPTM1O96005 NANOGP6-201ENST00000429190 847 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 RPS29P9-201ENST00000440360 171 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AL157827.1-201ENST00000447622 132 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 NDUFS5P3-201ENST00000450668 321 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AC092647.2-201ENST00000452998 253 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AC133473.1-201ENST00000455173 299 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AC093270.2-201ENST00000486157 792 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 HMGB1P38-201ENST00000490557 577 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AC010374.1-201ENST00000503762 1237 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
CLPTM1O96005 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLPTM1O96005 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AC012339.2-201ENST00000523996 453 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AC022832.1-201ENST00000530718 645 ntBASIC4.45□□□□□ -1.7
CLPTM1O96005 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.45□□□□□ -1.7
CLPTM1O96005 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.45□□□□□ -1.7
CLPTM1O96005 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms