Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SNORD116-12-201ENST00000384468 92 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 RNU6-906P-201ENST00000384700 70 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AP002530.1-201ENST00000405705 684 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 RN7SKP213-201ENST00000410746 298 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 RNU4-22P-201ENST00000411058 166 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 TMBIM7P-201ENST00000418074 855 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AC093162.1-201ENST00000419682 124 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AC092162.1-201ENST00000432828 434 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 EEF1A1P1-201ENST00000447052 739 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AC000111.2-201ENST00000448200 210 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AC239809.1-201ENST00000450470 217 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-2O95096 NPM1P13-201ENST00000452663 865 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 RPS6P2-201ENST00000454208 705 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 RN7SL177P-201ENST00000476596 299 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 GAPDHP39-201ENST00000481866 979 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 RPSAP50-201ENST00000481955 852 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AC004815.1-201ENST00000484185 331 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-2O95096 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 AC023632.1-201ENST00000518463 375 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AC010487.1-201ENST00000594408 1172 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AL450336.1-201ENST00000605180 586 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AC009974.1-201ENST00000608881 455 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AP000894.4-201ENST00000610185 483 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 EIF3FP1-201ENST00000613970 806 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.56□□□□□ -1.68
NKX2-2O95096 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
NKX2-2O95096 AL022322.2-201ENST00000624072 20397 ntBASIC4.56□□□□□ -1.68
NKX2-2O95096 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-2O95096 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NKX2-2O95096 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-2O95096 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC009643.2-201ENST00000603543 1448 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 Z95331.1-201ENST00000623075 23112 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC109780.1-201ENST00000451768 1344 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NKX2-2O95096 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 RNA5SP507-201ENST00000363603 121 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RNU4-4P-201ENST00000364588 130 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 Y_RNA.472-201ENST00000384322 102 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RPL31P52-201ENST00000407532 367 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RNA5SP345-201ENST00000410646 108 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 CTSL3P-202ENST00000412179 788 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 OR51B3P-201ENST00000412287 913 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 Z75741.2-201ENST00000417272 1167 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RPS3AP37-201ENST00000419176 745 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RPF2P1-201ENST00000424137 906 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-2O95096 RPS26P40-201ENST00000435209 294 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-2O95096 ELOCP11-201ENST00000436690 332 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 RPL7P11-201ENST00000437586 658 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 ELOCP16-201ENST00000444494 332 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AL589880.1-201ENST00000448271 287 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC112492.1-201ENST00000449607 712 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 MYO5BP2-201ENST00000449815 1277 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-2O95096 EIF4A1P11-201ENST00000451239 222 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 MRPL42P4-201ENST00000453267 443 ntBASIC4.55□□□□□ -1.68
NKX2-2O95096 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms