Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1BO75841 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK1BO75841 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1BO75841 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.64□□□□□ -1.83
UPK1BO75841 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1BO75841 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
UPK1BO75841 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1BO75841 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 AC010329.2-201ENST00000595195 2737 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
UPK1BO75841 RNU4-23P-201ENST00000362839 140 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 PGBD4P8-201ENST00000412993 562 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 FAR2P2-201ENST00000413041 594 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AC009237.5-201ENST00000414271 501 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.63□□□□□ -1.83
UPK1BO75841 EIF1P3-201ENST00000423841 334 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AL138785.1-201ENST00000425821 331 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 SKP1P1-201ENST00000438081 489 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.63□□□□□ -1.83
UPK1BO75841 SUMO2P1-206ENST00000445436 284 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 EEF1B2P3-201ENST00000447718 678 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 RN7SL727P-201ENST00000482164 296 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AC011037.1-201ENST00000483964 558 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1BO75841 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1BO75841 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 VTA1P2-201ENST00000520205 911 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 AC112191.2-201ENST00000522428 333 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AC090819.1-201ENST00000523800 1111 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1BO75841 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.63□□□□□ -1.83
UPK1BO75841 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.63□□□□□ -1.83
UPK1BO75841 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.63□□□□□ -1.83
UPK1BO75841 SS18L2P2-201ENST00000583960 235 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1BO75841 AL592295.2-201ENST00000612578 206 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 RNVU1-4-201ENST00000612985 164 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 AP006248.2-201ENST00000623309 592 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.63□□□□□ -1.83
UPK1BO75841 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.63□□□□□ -1.83
UPK1BO75841 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPK1BO75841 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
UPK1BO75841 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
UPK1BO75841 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK1BO75841 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK1BO75841 AC023490.2-201ENST00000359859 470 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 LYPLA1P3-201ENST00000402650 695 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.62□□□□□ -1.83
UPK1BO75841 RPL26P37-201ENST00000411983 438 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 BTF3P9-201ENST00000418784 283 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC002075.2-201ENST00000425207 252 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPK1BO75841 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.62□□□□□ -1.83
UPK1BO75841 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 YRDCP3-201ENST00000456507 480 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 RNU7-27P-201ENST00000459281 62 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC018638.3-201ENST00000461273 132 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.62□□□□□ -1.83
UPK1BO75841 RPS23P1-201ENST00000491662 432 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 MTND4LP2-201ENST00000502312 285 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC021087.2-201ENST00000504656 1203 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 OR4V1P-201ENST00000525394 1140 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 OR7E10P-201ENST00000526420 991 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
UPK1BO75841 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK1BO75841 AC009268.1-201ENST00000561352 1203 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
UPK1BO75841 AC020915.5-201ENST00000596836 964 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC006946.3-201ENST00000609791 756 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC093799.2-201ENST00000610062 578 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 AC079395.2-201ENST00000610982 737 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
UPK1BO75841 AP002505.2-201ENST00000623585 696 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC3.62□□□□□ -1.83
UPK1BO75841 SPATA2P1-201ENST00000431223 2055 ntBASIC3.62□□□□□ -1.83
UPK1BO75841 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UPK1BO75841 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms