Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL445423.1-201ENST00000609941 536 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 MIR6758-201ENST00000620653 63 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLDN3O15551 AC140479.6-201ENST00000633535 357 ntBASIC4.77□□□□□ -1.65
CLDN3O15551 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLDN3O15551 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN3O15551 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CLDN3O15551 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN3O15551 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN3O15551 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN3O15551 MIR320B1-201ENST00000390209 79 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN3O15551 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN3O15551 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN3O15551 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN3O15551 P2RY10P2-201ENST00000416730 913 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AC244453.4-201ENST00000419150 388 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 COX6CP17-201ENST00000421389 185 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 GAPDHP49-201ENST00000421421 961 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 NDUFA5P10-201ENST00000432147 357 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 RPS3AP54-201ENST00000435535 734 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 Z99127.2-201ENST00000441426 334 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN3O15551 AP002345.1-201ENST00000456493 928 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN3O15551 RPS23P7-201ENST00000466210 444 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 RPL35AP15-201ENST00000468042 339 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 RN7SL41P-201ENST00000476144 297 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AC090013.1-201ENST00000485147 480 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN3O15551 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN3O15551 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN3O15551 AC106806.2-201ENST00000509365 500 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AC090151.1-201ENST00000520784 730 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AC022784.5-201ENST00000522241 437 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN3O15551 PSMB7P1-201ENST00000556349 514 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN3O15551 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN3O15551 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN3O15551 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN3O15551 AC114781.5-201ENST00000615297 108 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 AL021997.2-201ENST00000615674 271 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 FP325313.1-201ENST00000638228 703 ntBASIC4.76□□□□□ -1.65
CLDN3O15551 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN3O15551 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN3O15551 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN3O15551 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN3O15551 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN3O15551 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLDN3O15551 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN3O15551 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN3O15551 AC017104.4-201ENST00000636283 1592 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN3O15551 LINC01109-201ENST00000603837 3081 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN3O15551 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN3O15551 AC011155.1-201ENST00000316512 456 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLDN3O15551 RPL32P3-201ENST00000359025 275 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 RNA5SP175-201ENST00000364275 119 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 RNU6-304P-201ENST00000364855 107 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 AMZ2P2-201ENST00000406819 1057 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 EIF4A1P3-201ENST00000411521 244 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 RPL21P108-201ENST00000413857 481 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN3O15551 AL606490.7-201ENST00000433136 191 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 RPL23AP52-201ENST00000439311 478 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 ACTR3P2-201ENST00000439585 1257 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 RPS27AP15-201ENST00000447672 466 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 EIF4A1P11-201ENST00000451239 222 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 AC026979.1-201ENST00000492525 396 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN3O15551 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN3O15551 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN3O15551 RPL23AP97-201ENST00000568955 471 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN3O15551 AL353600.1-201ENST00000608148 251 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 MLECP1-201ENST00000615893 709 ntBASIC4.75□□□□□ -1.65
CLDN3O15551 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN3O15551 CCT8P1-201ENST00000413611 1657 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms