Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RTCAO00442 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.58□□□□□ -1.68
RTCAO00442 CKS1BP6-201ENST00000424932 240 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.58□□□□□ -1.68
RTCAO00442 RPS17P8-201ENST00000434525 335 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 AC006326.1-201ENST00000445465 787 ntBASIC4.58□□□□□ -1.68
RTCAO00442 SLC25A18P1-201ENST00000449385 454 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.58□□□□□ -1.68
RTCAO00442 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 CYCSP53-201ENST00000455540 265 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AC104689.1-201ENST00000473356 768 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AP000926.1-201ENST00000479573 241 ntBASIC4.58□□□□□ -1.68
RTCAO00442 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 RPL23AP73-201ENST00000492507 471 ntBASIC4.58□□□□□ -1.68
RTCAO00442 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.58□□□□□ -1.68
RTCAO00442 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 GAPDHP56-201ENST00000506031 988 ntBASIC4.58□□□□□ -1.68
RTCAO00442 SNORA76.2-201ENST00000517095 137 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 AC004923.2-201ENST00000529649 369 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 BNIP3P1-201ENST00000547295 580 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AC133555.2-201ENST00000550213 292 ntBASIC4.58□□□□□ -1.68
RTCAO00442 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.58□□□□□ -1.68
RTCAO00442 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.58□□□□□ -1.68
RTCAO00442 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.58□□□□□ -1.68
RTCAO00442 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 AC022726.1-201ENST00000587475 207 ntBASIC4.58□□□□□ -1.68
RTCAO00442 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 NTAN1P1-201ENST00000603150 646 ntBASIC4.58□□□□□ -1.68
RTCAO00442 AL158196.1-201ENST00000616786 434 ntBASIC4.58□□□□□ -1.68
RTCAO00442 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.58□□□□□ -1.68
RTCAO00442 AC015804.1-201ENST00000622935 435 ntBASIC4.58□□□□□ -1.68
RTCAO00442 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.58□□□□□ -1.68
RTCAO00442 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RTCAO00442 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
RTCAO00442 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RTCAO00442 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RTCAO00442 SALL4P2-201ENST00000423288 2910 ntBASIC4.58□□□□□ -1.68
RTCAO00442 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.57□□□□□ -1.68
RTCAO00442 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 AL645733.1-201ENST00000402250 217 ntBASIC4.57□□□□□ -1.68
RTCAO00442 RPL23AP48-201ENST00000406913 488 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 COX6B1P1-201ENST00000415962 213 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.57□□□□□ -1.68
RTCAO00442 AL645608.4-201ENST00000423619 154 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 AL451139.1-201ENST00000434718 346 ntBASIC4.57□□□□□ -1.68
RTCAO00442 RPS7P5-201ENST00000441482 581 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 YWHAQP9-201ENST00000445891 512 ntBASIC4.57□□□□□ -1.68
RTCAO00442 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.57□□□□□ -1.68
RTCAO00442 AURKAPS2-201ENST00000454983 333 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AC146507.1-201ENST00000468335 354 ntBASIC4.57□□□□□ -1.68
RTCAO00442 RPL32P9-201ENST00000487963 407 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
RTCAO00442 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.57□□□□□ -1.68
RTCAO00442 CENPUP2-201ENST00000555897 1186 ntBASIC4.57□□□□□ -1.68
RTCAO00442 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RTCAO00442 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.57□□□□□ -1.68
RTCAO00442 AC009117.1-201ENST00000563948 554 ntBASIC4.57□□□□□ -1.68
RTCAO00442 TMF1P1-201ENST00000576058 373 ntBASIC4.57□□□□□ -1.68
RTCAO00442 MIR4646-201ENST00000580775 63 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 AL021707.7-201ENST00000607991 416 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AC006249.1-201ENST00000621223 471 ntBASIC4.57□□□□□ -1.68
RTCAO00442 AP006248.3-201ENST00000623580 594 ntBASIC4.57□□□□□ -1.68
RTCAO00442 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.57□□□□□ -1.68
RTCAO00442 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 NSRP1P1-201ENST00000444067 1693 ntBASIC4.57□□□□□ -1.68
RTCAO00442 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTCAO00442 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms