Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC017037.1-201ENST00000508460 471 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 OR5AN2P-201ENST00000534535 896 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 HNRNPCP4-201ENST00000571636 900 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC234771.5-201ENST00000600161 514 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC079587.1-201ENST00000603846 277 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 AL049555.1-201ENST00000562834 1933 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 PNPT1P2-201ENST00000456768 2050 ntBASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DRB4X5D2U9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AC134882.1-201ENST00000603738 1676 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 RNA5SP332-201ENST00000391063 115 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 RNA5SP306-201ENST00000411087 107 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 SNRPFP1-201ENST00000414761 252 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 CYP4F29P-201ENST00000420685 446 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AL356387.2-201ENST00000422272 243 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 CNOT7P1-201ENST00000429006 852 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 RPL12P28-201ENST00000430852 489 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AL035551.1-201ENST00000446931 348 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 MTND2P25-201ENST00000449028 610 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 DHFRP3-201ENST00000455595 559 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 ATP1B1P1-201ENST00000509767 915 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 MIR2114-201ENST00000516645 80 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AL352979.3-201ENST00000553515 247 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AC018552.3-201ENST00000567416 561 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AC004825.2-201ENST00000616634 455 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AL035461.2-201ENST00000619201 524 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AL133412.1-201ENST00000380194 2992 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 AC073429.2-201ENST00000569694 1444 ntBASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DRB4X5D2U9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 MFSD8-216ENST00000641147 4009 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AL137100.1-201ENST00000556703 1620 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 RNA5SP388-201ENST00000362584 119 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 RNU1-130P-201ENST00000363930 160 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 RNU1-89P-201ENST00000384592 164 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 MIR1911-201ENST00000410783 80 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 RPL37P18-201ENST00000411602 243 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 TMSB10P2-201ENST00000416049 131 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 OR6K4P-201ENST00000423179 955 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AC245028.1-201ENST00000423259 256 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 EIF1P3-201ENST00000423841 334 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 MTND4LP13-201ENST00000425022 298 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 NFYAP1-201ENST00000431953 972 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 PPIAP17-201ENST00000438507 471 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AF228730.2-201ENST00000438784 848 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 FHP1-201ENST00000442741 703 ntBASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DRB4X5D2U9 AC239809.1-201ENST00000450470 217 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms