Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC068714.1-201ENST00000559623 800 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL353997.4-201ENST00000586196 166 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC091768.1-201ENST00000609258 930 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC012629.3-201ENST00000623397 328 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 CR381572.1-201ENST00000625098 102 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 MAPK10-287ENST00000641217 3037 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC009220.2-201ENST00000489759 1751 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AC110597.1-201ENST00000562669 3176 ntBASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDHGA11Q9Y5H2 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC092447.10-201ENST00000620607 1652 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC013488.1-201ENST00000526618 1838 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.145-201ENST00000363527 102 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.184-201ENST00000363884 108 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.259-201ENST00000364619 101 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SKP6-201ENST00000364795 319 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR649-201ENST00000384843 97 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-316P-201ENST00000391027 107 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL31P52-201ENST00000407532 367 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL023807.1-201ENST00000407932 359 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 PRELID3BP11-201ENST00000414230 479 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 MTCYBP8-201ENST00000422855 651 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 DUTP6-201ENST00000425573 462 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RPS7P14-201ENST00000426405 583 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL445466.1-201ENST00000448432 357 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC007547.1-201ENST00000462177 490 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SL379P-201ENST00000479912 293 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL7AP10-201ENST00000481016 791 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 FTH1P8-201ENST00000498161 514 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 KLHL2P1-201ENST00000508691 521 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SKP256-201ENST00000517201 314 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 IGLC4-201ENST00000517690 248 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 PSMA2P1-201ENST00000526365 646 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AP006587.5-201ENST00000532033 739 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AP002373.2-201ENST00000541631 1060 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL356432.3-201ENST00000568952 465 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 LARP7P2-201ENST00000575306 125 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SL42P-201ENST00000579786 294 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AL354702.2-202ENST00000641481 890 ntBASIC6.65□□□□□ -1.34
PCDHGA11Q9Y5H2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms