Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC008562.1-201ENST00000521763 330 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 UBE2NP1-201ENST00000545592 458 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 HIGD1AP17-201ENST00000554576 276 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 ISCA1P3-201ENST00000577104 373 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 MIR3691-201ENST00000578066 90 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AL592221.1-201ENST00000605266 382 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 CDRT1-208ENST00000630868 794 ntBASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHB1Q9Y5F3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC125336.1-201ENST00000508893 2827 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC119744.1-201ENST00000454746 1715 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 IL6STP1-201ENST00000346911 1020 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 PPIAP9-201ENST00000403866 498 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 RNA5SP80-201ENST00000410475 111 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 QRSL1P2-201ENST00000418582 964 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 MRPS21P2-201ENST00000424704 264 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 RPL7P44-201ENST00000424827 742 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 USP9YP28-201ENST00000435142 589 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 OR52B5P-201ENST00000435337 951 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC118469.1-201ENST00000442943 488 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 MTCYBP3-201ENST00000445588 1137 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AL034418.1-201ENST00000448675 860 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 RN7SL860P-201ENST00000473738 223 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AP000797.2-201ENST00000475768 606 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC010587.2-201ENST00000511727 448 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 RN7SKP283-201ENST00000517197 270 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 CDH12P4-201ENST00000517835 295 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 CDH12P3-201ENST00000517935 295 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 CDH12P1-201ENST00000518435 295 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 OR4A43P-201ENST00000532938 908 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 OR4K7P-201ENST00000580232 945 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AL163642.2-201ENST00000604722 1019 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC074140.1-201ENST00000621617 208 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC073530.2-201ENST00000623987 261 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 OR52B5P-202ENST00000641118 1110 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC073869.8-201ENST00000641806 335 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 AL022393.1-201ENST00000625142 1677 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF542P-204ENST00000482727 1305 ntBASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHB1Q9Y5F3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms