Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RN7SL404P-201ENST00000582421 281 ntBASIC8.96□□□□□ -0.98
PHF8Q9UPP1 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 AC091768.1-201ENST00000609258 930 ntBASIC8.96□□□□□ -0.98
PHF8Q9UPP1 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 AC129915.3-201ENST00000634128 948 ntBASIC8.96□□□□□ -0.98
PHF8Q9UPP1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 AC119674.1-212ENST00000641155 993 ntBASIC8.96□□□□□ -0.98
PHF8Q9UPP1 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.96□□□□□ -0.98
PHF8Q9UPP1 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 AC013488.1-201ENST00000526618 1838 ntBASIC8.96□□□□□ -0.98
PHF8Q9UPP1 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.96□□□□□ -0.98
PHF8Q9UPP1 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 RNU6-666P-201ENST00000363499 107 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 RNA5SP510-201ENST00000364697 99 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 Y_RNA.339-201ENST00000365325 102 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AL583835.1-201ENST00000399570 407 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 MRPL42P3-201ENST00000401492 326 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AL121972.1-201ENST00000402023 252 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AL591416.1-201ENST00000404015 867 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 RNU4-26P-201ENST00000410270 107 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 RN7SKP247-201ENST00000411094 308 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AL357752.1-201ENST00000412817 349 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 RPL7P4-203ENST00000430239 730 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 TXNP1-201ENST00000441872 371 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 HLA-DPA3-207ENST00000454398 229 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC002075.1-201ENST00000457396 676 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC245389.1-201ENST00000605141 529 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 PRR13P7-201ENST00000605538 430 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC109309.2-201ENST00000612597 332 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC074141.1-201ENST00000588129 2995 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 AC027575.3-201ENST00000583058 2747 ntBASIC8.95□□□□□ -0.98
PHF8Q9UPP1 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.95□□□□□ -0.98
PHF8Q9UPP1 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 Y_RNA.301-201ENST00000364990 103 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 RNU6-1013P-201ENST00000384180 107 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 SNORA17A-201ENST00000391185 133 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 GPR143P-201ENST00000434155 205 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 RSU1P2-202ENST00000437884 485 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 GAPDHP14-201ENST00000450472 937 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AL935212.3-201ENST00000450729 284 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 HIGD1AP8-201ENST00000453927 274 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AL356010.1-201ENST00000456364 102 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 RPL37P3-201ENST00000456825 293 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 RN7SL174P-201ENST00000475578 289 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AL163973.1-201ENST00000484753 577 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 RNU6-976P-201ENST00000516086 111 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC060775.1-201ENST00000518241 520 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 NRBF2P4-201ENST00000520874 850 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AL591767.3-201ENST00000554632 525 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC004232.1-201ENST00000571388 208 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 SNORA70D-201ENST00000578836 135 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.94□□□□□ -0.98
PHF8Q9UPP1 RNU6-89P-201ENST00000606519 100 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC130324.3-201ENST00000614165 542 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 AC023509.5-201ENST00000617434 807 ntBASIC8.94□□□□□ -0.98
PHF8Q9UPP1 SNORA17.5-201ENST00000630429 132 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms