Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL049874.2-201ENST00000492636 288 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC092709.1-201ENST00000521355 1045 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 HMGB1P1-201ENST00000522557 636 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC010306.1-201ENST00000523223 1117 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 MTATP6P15-201ENST00000527233 835 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC005412.1-201ENST00000580812 1049 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC120349.3-201ENST00000624377 529 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 CASC19-221ENST00000641309 1382 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC006210.2-201ENST00000367074 1545 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 AC073055.1-201ENST00000456901 1621 ntBASIC5.37□□□□□ -1.55
VPS45Q9NRW7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS45Q9NRW7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC104260.2-201ENST00000623551 3497 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 RNU4-28P-201ENST00000364739 141 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 MIR92A2-201ENST00000385299 75 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 RN7SKP97-201ENST00000410966 333 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 RPS26P47-201ENST00000427219 348 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 NPM1P24-201ENST00000428039 894 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 PPIAP13-201ENST00000434706 478 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 SETP8-201ENST00000435341 628 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AL138878.2-201ENST00000440581 1241 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC104634.1-201ENST00000452720 462 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 snoU13.20-201ENST00000459180 104 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC009127.1-201ENST00000467090 155 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 NDUFA5P9-201ENST00000472609 340 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 RPL7P41-201ENST00000485823 957 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 RN7SL814P-201ENST00000487715 300 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC008565.1-201ENST00000509046 885 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC006427.1-201ENST00000514359 712 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC008562.1-201ENST00000521763 330 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 MTND4LP24-201ENST00000572277 291 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC127024.5-201ENST00000580085 462 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC008751.2-201ENST00000597885 980 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC234771.5-201ENST00000600161 514 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 GAS5-AS1-201ENST00000602767 694 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC024060.1-201ENST00000607052 494 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AL355816.1-201ENST00000607951 118 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AP002791.1-201ENST00000623291 381 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AC025574.1-201ENST00000554784 1653 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 AL031595.2-201ENST00000624215 19071 ntBASIC5.36□□□□□ -1.55
VPS45Q9NRW7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS45Q9NRW7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS45Q9NRW7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS45Q9NRW7 ADAM5-202ENST00000399789 1942 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS45Q9NRW7 AC090971.4-201ENST00000560291 1800 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VPS45Q9NRW7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS45Q9NRW7 AL133268.1-201ENST00000405676 1401 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 AC104623.2-202ENST00000623477 4002 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS45Q9NRW7 RNU6-1339P-201ENST00000363574 91 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS45Q9NRW7 RNA5SP87-201ENST00000384155 118 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 MIR589-201ENST00000385238 99 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.35□□□□□ -1.55
VPS45Q9NRW7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms