Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC8.8□□□□□ -1
RTN4Q9NQC3 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC8.8□□□□□ -1
RTN4Q9NQC3 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
RTN4Q9NQC3 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC8.8□□□□□ -1
RTN4Q9NQC3 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC8.8□□□□□ -1
RTN4Q9NQC3 AC090287.1-201ENST00000578374 291 ntBASIC8.8□□□□□ -1
RTN4Q9NQC3 MIR4424-201ENST00000585257 86 ntBASIC8.8□□□□□ -1
RTN4Q9NQC3 AC011444.4-201ENST00000586415 418 ntBASIC8.8□□□□□ -1
RTN4Q9NQC3 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC8.8□□□□□ -1
RTN4Q9NQC3 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC8.8□□□□□ -1
RTN4Q9NQC3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.8□□□□□ -1
RTN4Q9NQC3 AC025162.2-201ENST00000619602 560 ntBASIC8.8□□□□□ -1
RTN4Q9NQC3 AC007326.3-201ENST00000636418 176 ntBASIC8.8□□□□□ -1
RTN4Q9NQC3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
RTN4Q9NQC3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
RTN4Q9NQC3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.8□□□□□ -1
RTN4Q9NQC3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC8.8□□□□□ -1
RTN4Q9NQC3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC8.8□□□□□ -1
RTN4Q9NQC3 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.79□□□□□ -1
RTN4Q9NQC3 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC125336.1-201ENST00000508893 2827 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 RNU6-1287P-201ENST00000362914 107 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 RNU4-20P-201ENST00000365601 151 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 Y_RNA.387-201ENST00000383918 102 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 RNU6-1060P-201ENST00000384664 107 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC8.79□□□□□ -1
RTN4Q9NQC3 MRPS18BP2-201ENST00000434310 759 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AL162389.1-201ENST00000449233 177 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 RNU7-180P-201ENST00000459240 63 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 RN7SL834P-201ENST00000461450 286 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 AC008481.2-201ENST00000483614 531 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 Y_RNA.665-201ENST00000516177 98 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 AC009927.2-201ENST00000520812 481 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC107918.3-201ENST00000533272 382 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 WARSP1-201ENST00000533936 454 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.79□□□□□ -1
RTN4Q9NQC3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 SRP68P1-201ENST00000584247 269 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 IGHV3-29-201ENST00000604817 344 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 TUG1_2.1-201ENST00000614234 87 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC084879.1-201ENST00000636165 1201 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
RTN4Q9NQC3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.79□□□□□ -1
RTN4Q9NQC3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
RTN4Q9NQC3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.79□□□□□ -1
RTN4Q9NQC3 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RTN4Q9NQC3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
RTN4Q9NQC3 AC004076.2-201ENST00000620532 3323 ntBASIC8.79□□□□□ -1
RTN4Q9NQC3 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RTN4Q9NQC3 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RTN4Q9NQC3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC8.78□□□□□ -1
RTN4Q9NQC3 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RTN4Q9NQC3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
RTN4Q9NQC3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.78□□□□□ -1
RTN4Q9NQC3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.78□□□□□ -1
RTN4Q9NQC3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC8.78□□□□□ -1
RTN4Q9NQC3 AC073136.1-201ENST00000449426 2884 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
RTN4Q9NQC3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
RTN4Q9NQC3 Y_RNA.67-201ENST00000362870 100 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 SNORD46-201ENST00000364043 104 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 RN7SKP186-201ENST00000365371 303 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC8.78□□□□□ -1
RTN4Q9NQC3 AC019181.1-201ENST00000417151 310 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.78□□□□□ -1
RTN4Q9NQC3 RPL12P12-201ENST00000424633 501 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.78□□□□□ -1
RTN4Q9NQC3 MTCO3P45-201ENST00000443036 613 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 AL591623.2-201ENST00000449978 222 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 AC008481.1-201ENST00000463278 396 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 TRBV1-201ENST00000476502 284 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 RN7SL236P-201ENST00000484759 284 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 RN7SL135P-201ENST00000490144 278 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 ALDH7A1P3-201ENST00000492517 345 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC8.78□□□□□ -1
RTN4Q9NQC3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.78□□□□□ -1
RTN4Q9NQC3 AC112206.3-201ENST00000514578 389 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 RNA5SP92-201ENST00000516437 110 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 AC103843.2-201ENST00000530523 682 ntBASIC8.78□□□□□ -1
RTN4Q9NQC3 AL137161.1-201ENST00000532231 390 ntBASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms