Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC023825.1-201ENST00000566704 1030 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 TVP23CP2-201ENST00000571473 623 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 MIR4697-201ENST00000582977 78 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 MTCO3P22-201ENST00000603219 784 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AP004372.1-201ENST00000604842 844 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC026741.1-201ENST00000605892 482 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC012213.4-201ENST00000606457 354 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC090617.9-201ENST00000623751 147 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 FRG1DP-201ENST00000635586 771 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 LINC02211-204ENST00000642024 1070 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 RAD1P1-201ENST00000231383 813 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 Y_RNA.505-201ENST00000384489 102 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC007738.1-201ENST00000413892 348 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 MTCO3P4-201ENST00000419236 787 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 C4BPAP2-201ENST00000428434 478 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 COX6CP13-201ENST00000428703 226 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC068287.1-201ENST00000430283 295 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC046176.1-201ENST00000435260 1170 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC004980.3-201ENST00000447046 365 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 SEPT7P3-201ENST00000455017 621 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 HMGB1P4-201ENST00000455362 567 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 PPM1AP1-201ENST00000502740 1135 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC138938.1-201ENST00000515431 782 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 IGKV1-32-201ENST00000519290 311 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC021171.1-201ENST00000603137 706 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC124016.2-201ENST00000610058 665 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 RNU6-1192P-201ENST00000612197 107 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 RNU6-489P-201ENST00000618289 107 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AL512427.1-201ENST00000618593 349 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC019206.1-201ENST00000621938 425 ntBASIC5.09□□□□□ -1.59
EBF3Q9H4W6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
EBF3Q9H4W6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
EBF3Q9H4W6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
EBF3Q9H4W6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
EBF3Q9H4W6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
EBF3Q9H4W6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
EBF3Q9H4W6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
EBF3Q9H4W6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 ECM1P2-201ENST00000503354 1577 ntBASIC5.08□□□□□ -1.6
EBF3Q9H4W6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 AC021242.1-201ENST00000507315 2035 ntBASIC5.08□□□□□ -1.6
EBF3Q9H4W6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 OR5H2-201ENST00000355273 945 ntBASIC5.08□□□□□ -1.6
EBF3Q9H4W6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 RNA5SP332-201ENST00000391063 115 ntBASIC5.08□□□□□ -1.6
EBF3Q9H4W6 MIR298-201ENST00000401212 88 ntBASIC5.08□□□□□ -1.6
EBF3Q9H4W6 ZNF602P-201ENST00000405929 924 ntBASIC5.08□□□□□ -1.6
EBF3Q9H4W6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.08□□□□□ -1.6
EBF3Q9H4W6 MTATP6P20-201ENST00000414147 562 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms