Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR1183-201ENST00000408856 89 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC093698.1-201ENST00000423843 571 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 AL451139.1-201ENST00000434718 346 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 SNORA31.9-201ENST00000516429 84 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 OR4A2P-201ENST00000527276 913 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AP005901.4-201ENST00000577336 569 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 MIR5699-201ENST00000578903 90 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC006133.1-201ENST00000617106 264 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 CR381572.2-201ENST00000624852 397 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM4Q9C037 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM4Q9C037 RNA5SP509-201ENST00000364577 119 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM4Q9C037 RNU6-729P-201ENST00000384399 107 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 AL445189.1-201ENST00000405722 338 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 RSU1P3-201ENST00000412878 835 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 AMD1P2-201ENST00000412936 992 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 AC023141.6-201ENST00000429418 337 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 ELOCP18-201ENST00000434209 337 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 HMGB1P16-201ENST00000447155 540 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 IGKV2-23-201ENST00000518729 323 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM4Q9C037 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 AC107016.1-201ENST00000550463 337 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 AC002044.3-201ENST00000623314 541 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM4Q9C037 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM4Q9C037 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM4Q9C037 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 AC083899.2-201ENST00000423285 1376 ntBASIC4.49□□□□□ -1.69
TRIM4Q9C037 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM4Q9C037 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM4Q9C037 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM4Q9C037 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC092111.2-201ENST00000611627 1414 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM4Q9C037 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM4Q9C037 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 SNORA62.3-201ENST00000365110 153 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 Y_RNA.333-201ENST00000365274 102 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AL590762.2-201ENST00000395798 571 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AL080315.1-201ENST00000406055 466 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 MTND2P11-201ENST00000423638 648 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AP001324.1-201ENST00000428553 399 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 SLC25A18P1-201ENST00000449385 454 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 RNU7-157P-201ENST00000459600 66 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC025674.1-201ENST00000507074 324 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 SCARNA13-201ENST00000516672 275 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 RNA5SP143-201ENST00000516936 115 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 MIR2116-201ENST00000517221 80 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 DEFB109D-201ENST00000529497 240 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC105129.1-201ENST00000560250 297 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 CD24P2-201ENST00000565486 219 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC122134.1-201ENST00000565664 1104 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC015912.2-201ENST00000571053 181 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC022726.1-201ENST00000587475 207 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC008759.1-201ENST00000589783 983 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC022916.3-201ENST00000592961 742 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC020914.4-201ENST00000597690 277 ntBASIC4.48□□□□□ -1.69
TRIM4Q9C037 AC130352.1-201ENST00000602979 661 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms