Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LINC00561-201ENST00000565815 2738 ntBASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 AC011592.1-201ENST00000624647 3634 ntBASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 AF287957.1-201ENST00000607368 1595 ntBASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
CNTNAP3Q9BZ76 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AP003471.1-202ENST00000319051 1988 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-1120P-201ENST00000362988 108 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 SNORA62.2-201ENST00000364672 152 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 Y_RNA.301-201ENST00000364990 103 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 RN7SKP208-201ENST00000365474 361 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 MIR498-201ENST00000385134 124 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 MTCO3P19-201ENST00000415864 321 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC093151.1-201ENST00000427711 313 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 RPL17P49-201ENST00000443728 411 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 BX323845.2-201ENST00000458382 234 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 SNX18P26-201ENST00000458433 740 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC007547.1-201ENST00000462177 490 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 HMGB1P28-201ENST00000507778 552 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 SNORA25.10-201ENST00000515926 124 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-976P-201ENST00000516086 111 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-1261P-201ENST00000517194 104 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC009117.1-201ENST00000563948 554 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC245389.1-201ENST00000605141 529 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC096861.1-201ENST00000616652 240 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC023509.5-201ENST00000617434 807 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC009161.2-201ENST00000624626 138 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 SNX18P10-201ENST00000625014 519 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 SAMMSON-210ENST00000641260 1308 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 AC245100.2-201ENST00000454544 1679 ntBASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNTNAP3Q9BZ76 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-492P-201ENST00000363035 104 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms