Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 MIR4429-201ENST00000580105 73 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AL021997.2-201ENST00000615674 271 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 AL445363.3-201ENST00000623080 671 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 OR8B1P-202ENST00000641132 1178 ntBASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RPAP1Q9BWH6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 RN7SKP224-201ENST00000364140 325 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AL121834.1-202ENST00000404494 277 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 RN7SKP33-201ENST00000410942 340 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 RAB9AP4-201ENST00000415230 609 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 MTND6P5-201ENST00000448266 512 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AC002553.2-201ENST00000453217 340 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AL132838.2-201ENST00000492041 314 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 IFITM8P-201ENST00000522529 394 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 MTND2P17-201ENST00000550281 688 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AL161729.3-201ENST00000603533 673 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AP003400.2-201ENST00000624036 666 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 FP325313.1-201ENST00000638228 703 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 AC027228.2-201ENST00000567141 2154 ntBASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RPAP1Q9BWH6 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 RNA5SP175-201ENST00000364275 119 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AL160275.2-201ENST00000412010 394 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 EIF1P3-201ENST00000423841 334 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 HLA-N-201ENST00000437516 135 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AP002371.1-201ENST00000463604 433 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 TRBV8-1-201ENST00000481590 279 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AP002812.1-201ENST00000495378 474 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC104164.2-201ENST00000496953 495 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 SAP18P1-201ENST00000512058 390 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 RNA5SP73-201ENST00000516744 108 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AL352979.3-201ENST00000553515 247 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC099676.1-201ENST00000608886 657 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 LINC01109-201ENST00000603837 3081 ntBASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RPAP1Q9BWH6 AC007068.1-201ENST00000396690 844 ntBASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 AL157831.1-201ENST00000426134 473 ntBASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 PRELID3BP10-201ENST00000431957 584 ntBASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 AC022616.2-201ENST00000523185 300 ntBASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 RN7SL600P-201ENST00000581811 299 ntBASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 AC015813.4-201ENST00000610469 179 ntBASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.17□□□□□ -1.58
RPAP1Q9BWH6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms