Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 uc_338.18-201ENST00000615451 175 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 VN1R7P-201ENST00000619242 903 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
NUP88Q99567 AC104446.1-201ENST00000613728 1321 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.87□□□□□ -1.47
NUP88Q99567 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NUP88Q99567 AC011755.1-201ENST00000623763 2049 ntBASIC5.87□□□□□ -1.47
NUP88Q99567 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NUP88Q99567 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
NUP88Q99567 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP88Q99567 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NUP88Q99567 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP88Q99567 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NUP88Q99567 RN7SKP113-201ENST00000363891 295 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NUP88Q99567 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 AL390316.1-201ENST00000406279 553 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 Z75741.2-201ENST00000417272 1167 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 AC084290.1-201ENST00000434995 374 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 MTCYBP31-201ENST00000438855 1122 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC073648.4-201ENST00000442655 781 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 RPS29P33-201ENST00000456717 146 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP88Q99567 MTCO2P6-201ENST00000463134 685 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP88Q99567 MTCYBP35-201ENST00000503630 1137 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 IGBP1P5-201ENST00000507524 1000 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 SNORA70.11-201ENST00000515987 138 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 SNORA70.13-201ENST00000516116 138 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP88Q99567 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NUP88Q99567 AC137768.1-201ENST00000549998 553 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC044913.1-201ENST00000557200 430 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.86□□□□□ -1.47
NUP88Q99567 AC090888.2-201ENST00000559765 1144 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC040958.1-201ENST00000561102 201 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC090751.1-201ENST00000566966 267 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 MTND3P13-201ENST00000574391 343 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 VN1R84P-201ENST00000593697 235 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 AP000238.1-201ENST00000608759 426 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 AL138478.1-201ENST00000612252 832 ntBASIC5.86□□□□□ -1.47
NUP88Q99567 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP88Q99567 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP88Q99567 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP88Q99567 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP88Q99567 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP88Q99567 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP88Q99567 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP88Q99567 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NUP88Q99567 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP88Q99567 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
NUP88Q99567 SCARNA15-201ENST00000607520 4325 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC096656.1-201ENST00000623826 1364 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP88Q99567 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 RNA5SP443-201ENST00000363083 132 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 RNU1-87P-201ENST00000363727 170 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 RNA5SP87-201ENST00000384155 118 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 SNORA70.10-201ENST00000384515 134 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 RNU6-77P-201ENST00000410554 91 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP88Q99567 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP88Q99567 OR4K6P-201ENST00000416478 897 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 HMGB1P49-201ENST00000418882 569 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 MTCO3P21-201ENST00000430791 643 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 MOB1AP1-201ENST00000430903 535 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 NANOGP2-201ENST00000435391 727 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP88Q99567 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP88Q99567 OR7E125P-201ENST00000443450 846 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AL354714.3-201ENST00000447284 493 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 GAPDHP14-201ENST00000450472 937 ntBASIC5.85□□□□□ -1.47
NUP88Q99567 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP88Q99567 RPL23AP44-201ENST00000482216 473 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms