Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 SEPT7P8-201ENST00000413308 775 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 OR4F13P-201ENST00000428478 931 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AC104306.1-201ENST00000449702 371 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 AC233289.1-201ENST00000403700 508 ntBASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 RPL7P2-201ENST00000427639 268 ntBASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 NANOGP10-201ENST00000453325 895 ntBASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 RN7SKP141-201ENST00000516167 338 ntBASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 AC095038.2-201ENST00000621464 1070 ntBASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 AP005264.7-201ENST00000625003 745 ntBASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 AC027290.2-201ENST00000623210 18662 ntBASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.8□□□□□ -1.64
CDK5RAP2Q96SN8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 RNA5SP387-201ENST00000364226 106 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 RNA5SP97-201ENST00000365006 84 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 OR8F1P-201ENST00000425243 930 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC092447.2-201ENST00000435487 669 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 BTG4P1-201ENST00000510421 183 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AP005901.4-201ENST00000577336 569 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC090246.1-201ENST00000616499 426 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AL121890.2-201ENST00000617644 465 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC112198.2-201ENST00000426589 6996 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 MARK2P15-201ENST00000432204 2186 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC090220.1-201ENST00000593078 1699 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 PPIAP15-201ENST00000479662 484 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC146944.2-203ENST00000502493 354 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC139495.1-202ENST00000513164 354 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 AC012417.1-201ENST00000582307 1039 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 FP236240.3-201ENST00000623061 327 ntBASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP2Q96SN8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 Z95327.2-201ENST00000414579 1873 ntBASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 AL358232.1-201ENST00000448030 501 ntBASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 AC022968.1-201ENST00000567372 442 ntBASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 AL592436.1-201ENST00000605135 558 ntBASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP2Q96SN8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms