Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
IFT140Q96RY7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
IFT140Q96RY7 AL122016.1-201ENST00000403365 367 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 CBX1P3-201ENST00000413296 527 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 Z97055.1-201ENST00000419730 712 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 AL591419.1-201ENST00000427423 339 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 AC005726.1-201ENST00000494679 427 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.71□□□□□ -1.34
IFT140Q96RY7 RNA5SP179-201ENST00000517284 121 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 AC087369.1-201ENST00000520775 996 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.71□□□□□ -1.34
IFT140Q96RY7 MIMT1-201ENST00000597105 1050 ntBASIC6.71□□□□□ -1.34
IFT140Q96RY7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.71□□□□□ -1.34
IFT140Q96RY7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.71□□□□□ -1.34
IFT140Q96RY7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
IFT140Q96RY7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
IFT140Q96RY7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
IFT140Q96RY7 AC011755.1-201ENST00000623763 2049 ntBASIC6.7□□□□□ -1.34
IFT140Q96RY7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
IFT140Q96RY7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
IFT140Q96RY7 TCEA1P2-201ENST00000420496 906 ntBASIC6.7□□□□□ -1.34
IFT140Q96RY7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
IFT140Q96RY7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 AC092691.2-201ENST00000461787 803 ntBASIC6.7□□□□□ -1.34
IFT140Q96RY7 RPS3AP6-201ENST00000484430 795 ntBASIC6.7□□□□□ -1.34
IFT140Q96RY7 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
IFT140Q96RY7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 MIR4660-201ENST00000583549 74 ntBASIC6.7□□□□□ -1.34
IFT140Q96RY7 AL031658.2-201ENST00000616850 651 ntBASIC6.7□□□□□ -1.34
IFT140Q96RY7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
IFT140Q96RY7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.7□□□□□ -1.34
IFT140Q96RY7 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 AC083899.2-201ENST00000423285 1376 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 RNA5SP399-201ENST00000364003 117 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 HMGB3P19-201ENST00000403971 560 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 BX510359.1-201ENST00000456973 237 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 RPL5P24-201ENST00000463742 885 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 RN7SKP57-201ENST00000517248 293 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 AL121890.2-201ENST00000617644 465 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 AC073530.2-201ENST00000623987 261 ntBASIC6.69□□□□□ -1.34
IFT140Q96RY7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.69□□□□□ -1.34
IFT140Q96RY7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
IFT140Q96RY7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
IFT140Q96RY7 AP000432.2-201ENST00000624164 2048 ntBASIC6.68□□□□□ -1.34
IFT140Q96RY7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.68□□□□□ -1.34
IFT140Q96RY7 OR6C71P-201ENST00000432580 913 ntBASIC6.68□□□□□ -1.34
IFT140Q96RY7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.68□□□□□ -1.34
IFT140Q96RY7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.68□□□□□ -1.34
IFT140Q96RY7 AL049873.1-201ENST00000480540 376 ntBASIC6.68□□□□□ -1.34
IFT140Q96RY7 RN7SKP18-201ENST00000516005 275 ntBASIC6.68□□□□□ -1.34
IFT140Q96RY7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.68□□□□□ -1.34
IFT140Q96RY7 AC079880.2-201ENST00000603790 1213 ntBASIC6.68□□□□□ -1.34
IFT140Q96RY7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.68□□□□□ -1.34
IFT140Q96RY7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.68□□□□□ -1.34
IFT140Q96RY7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
IFT140Q96RY7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
IFT140Q96RY7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
IFT140Q96RY7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
IFT140Q96RY7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.68□□□□□ -1.34
IFT140Q96RY7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 DDX18P6-201ENST00000450119 1997 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 MTND2P15-201ENST00000418575 892 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 AL035423.1-201ENST00000420331 213 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
IFT140Q96RY7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 RPL23AP94-201ENST00000512518 302 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 RNA5SP230-201ENST00000517039 122 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 MIR5187-201ENST00000583479 76 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 AC091167.4-201ENST00000605079 184 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 MIR432-201ENST00000606207 94 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
IFT140Q96RY7 AC005005.4-201ENST00000623789 16698 ntBASIC6.67□□□□□ -1.34
IFT140Q96RY7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
IFT140Q96RY7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
IFT140Q96RY7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
IFT140Q96RY7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC6.67□□□□□ -1.34
IFT140Q96RY7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms