Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 OR5BR1P-201ENST00000524992 1330 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC104446.1-201ENST00000613728 1321 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 LARP1BP1-201ENST00000506036 1359 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNA5SP65-201ENST00000363166 119 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNU6-1184P-201ENST00000384588 108 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNU2-3P-201ENST00000410144 191 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 HYALP1-201ENST00000417674 1279 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 OR6C72P-201ENST00000451403 892 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC126121.1-201ENST00000482313 553 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RFPL4AP5-201ENST00000514977 504 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC093012.1-202ENST00000549403 582 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MIMT1-201ENST00000597105 1050 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC073091.2-201ENST00000603205 907 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AL138889.2-201ENST00000603883 242 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC069304.3-201ENST00000603938 1084 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC007619.2-201ENST00000605743 379 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC084036.1-201ENST00000609190 508 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC109347.2-201ENST00000610220 349 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC109583.2-201ENST00000617367 129 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MAPK10-323ENST00000641493 3207 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNU6-697P-201ENST00000363348 107 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RPL24P7-201ENST00000399435 453 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RNU6-387P-201ENST00000411331 105 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MTND2P15-201ENST00000418575 892 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC018865.2-201ENST00000423631 129 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 RIMKLBP2-201ENST00000424737 654 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AL445646.1-201ENST00000431784 216 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AL365400.1-201ENST00000431854 640 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC006326.1-201ENST00000445465 787 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 Z92846.1-201ENST00000456203 268 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC104629.2-201ENST00000468627 598 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC090638.1-201ENST00000498296 909 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC007599.1-201ENST00000568688 1174 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AL162730.1-201ENST00000605734 292 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AC034236.3-201ENST00000605999 461 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AL357078.3-201ENST00000607528 618 ntBASIC1.75□□□□□ -2.13
HMCN1Q96RW7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMCN1Q96RW7 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms