Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC022509.4-201ENST00000621404 572 ntBASIC4.96□□□□□ -1.62
SNX18Q96RF0 AC006840.1-201ENST00000623069 542 ntBASIC4.96□□□□□ -1.62
SNX18Q96RF0 AL359757.1-201ENST00000623176 255 ntBASIC4.96□□□□□ -1.62
SNX18Q96RF0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX18Q96RF0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX18Q96RF0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
SNX18Q96RF0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNX18Q96RF0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.96□□□□□ -1.62
SNX18Q96RF0 RARSP1-201ENST00000542842 1418 ntBASIC4.96□□□□□ -1.62
SNX18Q96RF0 AP005901.5-201ENST00000545779 1796 ntBASIC4.96□□□□□ -1.62
SNX18Q96RF0 ZNF542P-204ENST00000482727 1305 ntBASIC4.96□□□□□ -1.62
SNX18Q96RF0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AL034370.1-201ENST00000397254 1590 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AL672167.1-204ENST00000641875 3017 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 RNU1-146P-201ENST00000364015 165 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RNU6-707P-201ENST00000364647 95 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RNA5SP131-201ENST00000365452 119 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 OR1L1-202ENST00000373686 1083 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RPL21P67-201ENST00000402896 478 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 SNORA11C-201ENST00000408532 129 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RNU2-22P-201ENST00000411266 212 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC098592.1-201ENST00000419352 333 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RPL34P3-201ENST00000421454 338 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AP001324.1-201ENST00000428553 399 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 MTCYBP34-201ENST00000439552 670 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 MTND3P1-201ENST00000441336 220 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC080014.1-201ENST00000496877 1201 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC008837.2-201ENST00000513076 418 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RNA5SP362-201ENST00000516048 118 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RNA5SP464-201ENST00000516251 108 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 IGJP1-201ENST00000522682 475 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 MRPS16P1-201ENST00000523462 412 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC022404.1-201ENST00000555320 273 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC010547.6-201ENST00000571789 193 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 DUXAP11-201ENST00000603858 526 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AP005137.2-201ENST00000609238 400 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 RNA5SP440-201ENST00000612665 119 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 Z69908.1-201ENST00000622603 247 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC015871.5-202ENST00000623252 701 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 AC100778.3-201ENST00000580060 1750 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX18Q96RF0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 RLIMP2-201ENST00000427891 1563 ntBASIC4.95□□□□□ -1.62
SNX18Q96RF0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
SNX18Q96RF0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX18Q96RF0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX18Q96RF0 HMGB3P7-201ENST00000400214 611 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 GAPDHP42-201ENST00000406848 981 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 RN7SKP59-201ENST00000410520 314 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 RNU6-575P-201ENST00000411326 105 ntBASIC4.94□□□□□ -1.62
SNX18Q96RF0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms