Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 RNA5SP502-201ENST00000362694 119 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 RNU4-23P-201ENST00000362839 140 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 RNA5SP509-201ENST00000364577 119 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 SNORD96B-201ENST00000386148 79 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 MIR3065-201ENST00000390137 79 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AL034374.1-201ENST00000406329 351 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AL592293.2-201ENST00000422292 996 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC073143.1-201ENST00000436316 395 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 ELOCP10-201ENST00000440624 327 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 RN7SL98P-201ENST00000462271 300 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 RPS27AP16-201ENST00000492222 470 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC083829.1-201ENST00000503756 657 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC025674.1-201ENST00000507074 324 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 HPRT1P1-201ENST00000509498 657 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC010476.1-201ENST00000519111 851 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC090281.1-201ENST00000523019 276 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 OR8G5-201ENST00000524943 1041 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 GLRXP2-201ENST00000555594 321 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AP001542.1-201ENST00000591314 200 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 ELOCP34-201ENST00000604436 327 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AL160290.3-201ENST00000604869 165 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 MIR378J-201ENST00000611988 109 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 CYP1D1P-201ENST00000416662 1433 ntBASIC4.55□□□□□ -1.68
RPRD1AQ96P16 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RPRD1AQ96P16 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 MIR331-201ENST00000362302 94 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 VDAC1P9-201ENST00000412766 841 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 RPS29P17-201ENST00000430795 166 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CDY14P-201ENST00000431260 1014 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CACYBPP1-201ENST00000438592 684 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CBX1P1-201ENST00000440184 427 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CDY12P-201ENST00000440679 1015 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CDY13P-201ENST00000445813 1015 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CDY23P-201ENST00000451661 1014 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AC092905.1-201ENST00000467527 949 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 RN7SL812P-201ENST00000493791 279 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CYCSP28-201ENST00000534284 321 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AC079587.1-201ENST00000603846 277 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AC026368.1-201ENST00000614934 690 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AL121890.3-201ENST00000618494 516 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AC005086.4-201ENST00000623065 213 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CASC19-284ENST00000642142 1868 ntBASIC4.54□□□□□ -1.68
RPRD1AQ96P16 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPRD1AQ96P16 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPRD1AQ96P16 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms