Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNU1-87P-201ENST00000363727 170 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AL162388.1-201ENST00000450912 352 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AC108729.2-201ENST00000476543 840 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AC074386.1-201ENST00000476560 767 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 RPL30P11-201ENST00000495304 339 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 MTND3P3-201ENST00000505004 126 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 OR5M14P-201ENST00000506803 618 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 RNA5SP446-201ENST00000515955 82 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 RN7SKP276-201ENST00000516242 268 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 HMGB1P19-201ENST00000517578 577 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 OR5AN2P-201ENST00000534535 896 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AL110118.1-201ENST00000553543 400 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 MIR3667-201ENST00000581025 74 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 MIR4737-201ENST00000583979 81 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 RPL7P50-201ENST00000600588 727 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 ABI1P1-201ENST00000603375 1120 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 OR7A19P-201ENST00000608051 733 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AC016717.3-201ENST00000624730 554 ntBASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDLIM5Q96HC4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 MAPK10-263ENST00000641052 4307 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC009951.1-201ENST00000623674 2614 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 RNA5SP191-201ENST00000362585 102 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 RNU6-252P-201ENST00000363232 107 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC023141.6-201ENST00000429418 337 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 RPL17P35-201ENST00000432217 549 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC016831.4-201ENST00000438302 307 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 CYCSP42-201ENST00000450823 238 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 ISCUP1-201ENST00000454451 448 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 RPL5P30-201ENST00000465511 891 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 TRBV8-2-201ENST00000475637 270 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 RPL36AP41-201ENST00000493820 306 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC098799.3-201ENST00000506095 438 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC010468.3-201ENST00000508225 458 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC021146.3-201ENST00000511911 260 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 RN7SKP82-201ENST00000516786 223 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 SNORA76.2-201ENST00000517095 137 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 OR5AK3P-201ENST00000527486 1297 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 OSBPL9P3-201ENST00000534523 595 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 RPL21P7-201ENST00000557463 483 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 MTND4LP25-201ENST00000570218 163 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 BNIP3P32-201ENST00000600015 554 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AP003117.1-201ENST00000602771 554 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC023762.1-201ENST00000603280 584 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC091979.2-201ENST00000607514 214 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AC005086.4-201ENST00000623065 213 ntBASIC4.56□□□□□ -1.68
PDLIM5Q96HC4 AP000843.1-201ENST00000624880 701 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms