Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 GNL2P1-201ENST00000451274 2190 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 HSPA8P17-201ENST00000427029 1382 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RPL21P132-201ENST00000331267 462 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RNU5F-6P-201ENST00000362979 116 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 SNORD56.2-201ENST00000363242 71 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RNU6-254P-201ENST00000363377 107 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 SNORD65.1-201ENST00000390889 71 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RPL10P10-201ENST00000403509 664 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC068138.1-201ENST00000412635 217 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RPL12P9-201ENST00000412942 488 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 SAR1AP4-201ENST00000429225 591 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 MTCO1P54-201ENST00000430139 712 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AL050321.1-201ENST00000432363 400 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 SNRPFP4-201ENST00000456366 242 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RPS3AP14-201ENST00000483907 780 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC090013.1-201ENST00000485147 480 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 SCARNA21.2-201ENST00000516600 166 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RNA5SP400-201ENST00000517155 111 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AP005639.1-201ENST00000526939 192 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AP000648.1-201ENST00000529682 397 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AL355836.1-201ENST00000555951 870 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 COX6CP7-201ENST00000597056 208 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 BNIP3P10-201ENST00000605360 577 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AL158196.1-201ENST00000616786 434 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AL139089.1-201ENST00000620372 975 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC011369.2-201ENST00000624423 1567 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 AC093297.3-201ENST00000607056 2517 ntBASIC6.34□□□□□ -1.39
SHKBP1Q8TBC3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SHKBP1Q8TBC3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SHKBP1Q8TBC3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SHKBP1Q8TBC3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 AC027088.4-201ENST00000611559 1947 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 AC012078.1-201ENST00000405035 1646 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 MIR323A-201ENST00000362199 86 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 Y_RNA.58-201ENST00000362807 102 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 Y_RNA.154-201ENST00000363624 102 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 RNA5SP242-201ENST00000364171 118 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 RNY3P1-201ENST00000365085 102 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 RNY3-201ENST00000365484 102 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 SNORA70.9-201ENST00000384370 135 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 Y_RNA.490-201ENST00000384413 102 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 AL161631.1-201ENST00000417933 486 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 NENFP1-201ENST00000419476 466 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 RPS15AP30-201ENST00000420976 390 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 AL389915.1-201ENST00000422463 466 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 FAM96AP1-201ENST00000430879 482 ntBASIC6.33□□□□□ -1.4
SHKBP1Q8TBC3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms