Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 SNORD39.2-201ENST00000579995 76 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC017076.1-201ENST00000607613 578 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AL135786.2-201ENST00000608422 615 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 RNA5SP447-201ENST00000363749 119 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AL161631.1-201ENST00000417933 486 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 SEC63P1-201ENST00000425785 1258 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 UBE2V2P1-201ENST00000434717 398 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 RPL23AP52-201ENST00000439311 478 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AL512326.1-201ENST00000443050 721 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 RPL23AP24-201ENST00000458203 385 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 RN7SL738P-201ENST00000470264 297 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 PPBPP1-201ENST00000510807 373 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 CDH12P4-201ENST00000517835 295 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 CDH12P3-201ENST00000517935 295 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 CDH12P1-201ENST00000518435 295 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC006064.5-201ENST00000541782 248 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AL109766.1-201ENST00000555080 552 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 MTND6P33-201ENST00000571794 183 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC104785.1-201ENST00000603220 588 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AL354984.3-201ENST00000604803 325 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 AC004825.2-201ENST00000616634 455 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 PHKBP1-201ENST00000450951 1951 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 EIF2AP4-201ENST00000424793 1781 ntBASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC65Q8IXS2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC134882.1-201ENST00000603738 1676 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 ELOCP19-201ENST00000411919 318 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC079804.1-201ENST00000461922 436 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 RPS23P1-201ENST00000491662 432 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC010476.1-201ENST00000519111 851 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC025857.1-201ENST00000525252 377 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC068831.4-201ENST00000556118 109 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 MIR4330-201ENST00000579077 105 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 OR6R2P-201ENST00000609216 300 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 AC053481.2-202ENST00000582394 1500 ntBASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC65Q8IXS2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CCDC65Q8IXS2 RNU1-108P-201ENST00000362556 161 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms