Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL445523.1-201ENST00000451184 1362 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 OR56B2P-201ENST00000317102 954 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 MIR375-201ENST00000362103 64 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 RNU6-553P-201ENST00000364047 96 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 RNA5SP394-201ENST00000364216 119 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 SNORD65.1-201ENST00000390889 71 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 TAF9BP1-201ENST00000396646 746 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 RNA5SP80-201ENST00000410475 111 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 CTSL3P-202ENST00000412179 788 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 MTCO1P54-201ENST00000430139 712 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 USP9YP31-201ENST00000431405 881 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 USP9YP22-201ENST00000438971 294 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC073648.4-201ENST00000442655 781 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC012512.1-201ENST00000446594 718 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 APOOP2-201ENST00000461561 539 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 UBA52P3-201ENST00000491303 382 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC069304.1-201ENST00000491593 704 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 RPS24P16-201ENST00000497294 392 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 DYNLL1P6-201ENST00000503440 264 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 MTCYBP16-201ENST00000509187 1129 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC108471.1-201ENST00000513977 287 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 LSM3P2-201ENST00000551246 273 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC116553.2-201ENST00000564203 463 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 MIR4999-201ENST00000585029 91 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC006539.2-201ENST00000601729 572 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 DUXAP11-201ENST00000603858 526 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 MIR7973-1-201ENST00000614683 76 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC005840.5-201ENST00000619166 599 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC129915.3-201ENST00000634128 948 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 ASNSP1-201ENST00000518311 1939 ntBASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTCHD4Q6ZW05 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 AC010329.2-201ENST00000595195 2737 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 SGO1P1-201ENST00000603525 1447 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 THAP12P5-201ENST00000405864 2275 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 IL6STP1-201ENST00000346911 1020 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 Y_RNA.201-201ENST00000364052 96 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 RN7SKP187-201ENST00000365536 330 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 RNU6-225P-201ENST00000384613 103 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 MIR16-1-201ENST00000385271 89 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 MRPS36P1-201ENST00000421291 307 ntBASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.92□□□□□ -1.62
PTCHD4Q6ZW05 AKR1B10P1-201ENST00000425765 942 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms