Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC095055.1-201ENST00000603472 1113 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC096553.1-201ENST00000605169 829 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC000068.2-201ENST00000608816 460 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC131235.4-201ENST00000609288 620 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC010632.3-201ENST00000611377 369 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC116618.1-201ENST00000634617 774 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 MKKS-204ENST00000639674 192 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC002525.1-201ENST00000624392 1622 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AL034370.1-201ENST00000397254 1590 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC011447.7-201ENST00000624228 1590 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 OR9K1P-202ENST00000641111 3217 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 FAM3C2-201ENST00000312214 681 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RNU5D-1-201ENST00000363299 116 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RNA5SP187-201ENST00000384400 119 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RNU6-178P-201ENST00000384631 104 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 HNRNPDP2-201ENST00000406475 478 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RPL23AP47-201ENST00000408017 460 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 PRELID3BP11-201ENST00000414230 479 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 OR10T1P-201ENST00000424327 947 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 OR52B5P-201ENST00000435337 951 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 OR6D1P-201ENST00000436165 939 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 KATNBL1P3-201ENST00000443475 909 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC010468.1-201ENST00000461022 817 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RPL15P21-201ENST00000495592 567 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 KLRA1P-201ENST00000503499 986 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC021193.1-201ENST00000511607 420 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 SOD1P3-201ENST00000518682 454 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 HMGN2P6-201ENST00000551091 273 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 Z94722.1-201ENST00000604328 474 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AL136295.6-201ENST00000610486 658 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AL121612.2-201ENST00000612261 482 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 OR52B5P-202ENST00000641118 1110 ntBASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC144BQ3MJ40 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.4
CCDC144BQ3MJ40 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC144BQ3MJ40 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC107982.1-201ENST00000507171 1300 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 AC068870.1-201ENST00000563737 2455 ntBASIC6.33□□□□□ -1.4
CCDC144BQ3MJ40 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms