Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL352979.3-201ENST00000553515 247 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 MIR3934-201ENST00000579806 107 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 MIR4737-201ENST00000583979 81 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AC123786.2-201ENST00000603459 275 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AC013244.1-201ENST00000604279 193 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AC090953.1-201ENST00000604305 1092 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 ELOCP34-201ENST00000604436 327 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.03□□□□□ -1.76
RFX4Q33E94 AC211433.2-201ENST00000608433 387 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AC078899.5-201ENST00000612475 178 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 MIR6719-201ENST00000622428 87 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 AL359715.5-201ENST00000623431 443 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.03□□□□□ -1.76
RFX4Q33E94 LINC01808-202ENST00000641680 1116 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 USP9YP4-201ENST00000424401 1745 ntBASIC4.03□□□□□ -1.76
RFX4Q33E94 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFX4Q33E94 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFX4Q33E94 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AC132825.1-201ENST00000463573 2247 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.02□□□□□ -1.77
RFX4Q33E94 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AC009313.2-201ENST00000417893 1941 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX4Q33E94 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX4Q33E94 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RFX4Q33E94 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX4Q33E94 RNU6-618P-201ENST00000363518 112 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 RNU4-7P-201ENST00000364758 141 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 SNORD66.1-201ENST00000391230 76 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX4Q33E94 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX4Q33E94 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFX4Q33E94 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.02□□□□□ -1.77
RFX4Q33E94 UBE2V1P3-201ENST00000439651 417 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 AC114495.1-201ENST00000441274 436 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 TPTE2P3-201ENST00000441562 1189 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 RPL7P61-201ENST00000451721 751 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 RAD23BP3-201ENST00000454157 1152 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 RPS3AP41-201ENST00000462701 778 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 RPL23AP71-201ENST00000470966 469 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 AC011005.3-201ENST00000491624 395 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RFX4Q33E94 PRELID3BP7-201ENST00000503606 469 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 IGLVIV-53-201ENST00000520107 367 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX4Q33E94 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.02□□□□□ -1.77
RFX4Q33E94 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AC091042.1-201ENST00000579213 173 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 ELOCP28-201ENST00000590044 317 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 AC020915.5-201ENST00000596836 964 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.02□□□□□ -1.77
RFX4Q33E94 AC015722.2-201ENST00000622210 551 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.02□□□□□ -1.77
RFX4Q33E94 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RFX4Q33E94 MAPK10-253ENST00000641010 4072 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 AC087565.3-202ENST00000642085 1603 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.02□□□□□ -1.77
RFX4Q33E94 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
RFX4Q33E94 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 Z73965.1-201ENST00000623412 2297 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.01□□□□□ -1.77
RFX4Q33E94 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RFX4Q33E94 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 AC093311.1-201ENST00000506586 2021 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
RFX4Q33E94 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 SNORA3C-201ENST00000408792 125 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 RN7SKP56-201ENST00000410513 331 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 RPS20P14-201ENST00000412545 360 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 AL391219.1-201ENST00000422570 483 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AJ239321.1-201ENST00000424255 564 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AC104837.2-201ENST00000427236 424 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 RPL23AP89-201ENST00000439324 255 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AC073648.4-201ENST00000442655 781 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 RSL24D1P2-201ENST00000445584 366 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 MTND2P25-201ENST00000449028 610 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 IFNWP4-201ENST00000453148 294 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 RPS3AP53-201ENST00000454716 778 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.01□□□□□ -1.77
RFX4Q33E94 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.01□□□□□ -1.77
RFX4Q33E94 SEC11B-201ENST00000518383 499 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AC104997.1-201ENST00000519761 717 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.01□□□□□ -1.77
RFX4Q33E94 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 BRD9P1-201ENST00000529855 560 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.01□□□□□ -1.77
RFX4Q33E94 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RFX4Q33E94 UBE2FP2-201ENST00000566646 462 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AL139286.1-201ENST00000604465 483 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 AC010200.2-201ENST00000605098 235 ntBASIC4.01□□□□□ -1.77
RFX4Q33E94 HMGB1P50-201ENST00000605814 607 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms