Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH4P55283 AL445423.1-201ENST00000609941 536 ntBASIC4.48□□□□□ -1.69
CDH4P55283 AL021997.2-201ENST00000615674 271 ntBASIC4.48□□□□□ -1.69
CDH4P55283 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH4P55283 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH4P55283 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.48□□□□□ -1.69
CDH4P55283 FP325313.1-201ENST00000638228 703 ntBASIC4.48□□□□□ -1.69
CDH4P55283 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDH4P55283 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH4P55283 LINC01109-201ENST00000603837 3081 ntBASIC4.48□□□□□ -1.69
CDH4P55283 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.48□□□□□ -1.69
CDH4P55283 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH4P55283 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CDH4P55283 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 RNA5SP175-201ENST00000364275 119 ntBASIC4.47□□□□□ -1.69
CDH4P55283 RNU6-670P-201ENST00000364312 104 ntBASIC4.47□□□□□ -1.69
CDH4P55283 SNORA62-201ENST00000365493 153 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC097374.1-203ENST00000400783 485 ntBASIC4.47□□□□□ -1.69
CDH4P55283 RN7SKP222-201ENST00000410651 315 ntBASIC4.47□□□□□ -1.69
CDH4P55283 EIF4A1P3-201ENST00000411521 244 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH4P55283 UBTFL3-201ENST00000418934 1024 ntBASIC4.47□□□□□ -1.69
CDH4P55283 C4BPAP2-201ENST00000428434 478 ntBASIC4.47□□□□□ -1.69
CDH4P55283 MAPRE1P3-201ENST00000435438 796 ntBASIC4.47□□□□□ -1.69
CDH4P55283 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH4P55283 RPL23AP52-201ENST00000439311 478 ntBASIC4.47□□□□□ -1.69
CDH4P55283 ACTR3P2-201ENST00000439585 1257 ntBASIC4.47□□□□□ -1.69
CDH4P55283 ELOCP10-201ENST00000440624 327 ntBASIC4.47□□□□□ -1.69
CDH4P55283 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH4P55283 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH4P55283 RPS23P7-201ENST00000466210 444 ntBASIC4.47□□□□□ -1.69
CDH4P55283 RPL35AP15-201ENST00000468042 339 ntBASIC4.47□□□□□ -1.69
CDH4P55283 UBTFL6-201ENST00000477929 1024 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC012158.1-204ENST00000483430 465 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC010374.1-201ENST00000503762 1237 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC091917.2-201ENST00000505002 744 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH4P55283 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH4P55283 MTCYBP19-201ENST00000517463 1124 ntBASIC4.47□□□□□ -1.69
CDH4P55283 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH4P55283 AC068714.1-201ENST00000559623 800 ntBASIC4.47□□□□□ -1.69
CDH4P55283 HMGB3P26-201ENST00000560051 582 ntBASIC4.47□□□□□ -1.69
CDH4P55283 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH4P55283 AC090312.1-201ENST00000580637 348 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC008759.1-201ENST00000589783 983 ntBASIC4.47□□□□□ -1.69
CDH4P55283 ELOCP28-201ENST00000590044 317 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH4P55283 AC123786.2-201ENST00000603459 275 ntBASIC4.47□□□□□ -1.69
CDH4P55283 ELOCP34-201ENST00000604436 327 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AL353726.1-201ENST00000614041 1000 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AC114781.5-201ENST00000615297 108 ntBASIC4.47□□□□□ -1.69
CDH4P55283 AL158196.1-201ENST00000616786 434 ntBASIC4.47□□□□□ -1.69
CDH4P55283 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH4P55283 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CDH4P55283 AC092435.4-201ENST00000623012 4159 ntBASIC4.47□□□□□ -1.69
CDH4P55283 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CDH4P55283 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDH4P55283 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH4P55283 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.46□□□□□ -1.69
CDH4P55283 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CDH4P55283 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.46□□□□□ -1.69
CDH4P55283 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH4P55283 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CDH4P55283 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CDH4P55283 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.69
CDH4P55283 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH4P55283 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDH4P55283 CCT8P1-201ENST00000413611 1657 ntBASIC4.46□□□□□ -1.7
CDH4P55283 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH4P55283 AC011155.1-201ENST00000316512 456 ntBASIC4.46□□□□□ -1.7
CDH4P55283 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDH4P55283 RNA5SP22-201ENST00000365393 109 ntBASIC4.46□□□□□ -1.7
CDH4P55283 P2RY10P2-201ENST00000416730 913 ntBASIC4.46□□□□□ -1.7
CDH4P55283 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH4P55283 EIF1P3-201ENST00000423841 334 ntBASIC4.46□□□□□ -1.7
CDH4P55283 RPEP2-201ENST00000432149 701 ntBASIC4.46□□□□□ -1.7
CDH4P55283 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH4P55283 RPS3AP54-201ENST00000435535 734 ntBASIC4.46□□□□□ -1.7
CDH4P55283 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.46□□□□□ -1.7
CDH4P55283 AL512326.1-201ENST00000443050 721 ntBASIC4.46□□□□□ -1.7
CDH4P55283 RPS27AP15-201ENST00000447672 466 ntBASIC4.46□□□□□ -1.7
CDH4P55283 VN1R48P-201ENST00000448149 1036 ntBASIC4.46□□□□□ -1.7
CDH4P55283 EIF4A1P11-201ENST00000451239 222 ntBASIC4.46□□□□□ -1.7
CDH4P55283 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms