Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC013701.1-201ENST00000522657 465 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.95□□□□□ -1.46
EPHB3P54753 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.95□□□□□ -1.46
EPHB3P54753 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
EPHB3P54753 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.95□□□□□ -1.46
EPHB3P54753 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.95□□□□□ -1.46
EPHB3P54753 AL163952.1-202ENST00000569625 600 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.95□□□□□ -1.46
EPHB3P54753 MIR1269B-201ENST00000580405 75 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 FKBP1AP1-201ENST00000594588 318 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 AC006115.2-201ENST00000596823 202 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 SUGT1P3-202ENST00000604259 383 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 AC092111.2-201ENST00000611627 1414 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 AL359697.1-201ENST00000624879 587 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 AC099063.3-201ENST00000642066 185 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 AC239868.2-201ENST00000564237 4527 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 MTND5P26-201ENST00000426018 1752 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
EPHB3P54753 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
EPHB3P54753 AC073365.1-203ENST00000641055 1992 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.95□□□□□ -1.46
EPHB3P54753 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 MFSD8-239ENST00000641590 2479 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 AC092326.2-201ENST00000624772 1561 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
EPHB3P54753 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC093719.1-202ENST00000392735 373 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 RPL23AP59-201ENST00000399415 461 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 MIR1286-201ENST00000408112 78 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 RPL26P37-201ENST00000411983 438 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 HMGB3P31-201ENST00000413333 595 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC006335.2-201ENST00000437993 330 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 MTATP6P30-201ENST00000443540 664 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 DDX39BP2-208ENST00000453923 258 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 RPS20P4-201ENST00000461659 355 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AP000852.1-201ENST00000472460 573 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 RPL7P39-201ENST00000481157 744 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC090638.1-201ENST00000498296 909 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
EPHB3P54753 IGBP1P5-201ENST00000507524 1000 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 TOMM22P4-201ENST00000511318 336 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.94□□□□□ -1.46
EPHB3P54753 RFPL4AP3-201ENST00000515267 345 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 SNORA20.3-201ENST00000516880 132 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 RN7SKP99-201ENST00000517028 307 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC078899.1-201ENST00000521432 1185 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 HSPE1P2-201ENST00000554777 306 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
EPHB3P54753 MTCO3P13-201ENST00000577757 781 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC005730.3-201ENST00000583067 366 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC006504.3-201ENST00000586818 523 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.94□□□□□ -1.46
EPHB3P54753 AC103881.1-201ENST00000603476 538 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 IMMP1LP3-201ENST00000604197 224 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC009220.3-201ENST00000604318 586 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AL354760.1-201ENST00000608357 643 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AL136981.2-201ENST00000617319 734 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC012414.7-202ENST00000622705 1090 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 CR381653.2-201ENST00000624041 768 ntBASIC5.94□□□□□ -1.46
EPHB3P54753 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.94□□□□□ -1.46
EPHB3P54753 LRRC77P-213ENST00000637727 880 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms