Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.75□□□□□ -1.49
CLTCL1P53675 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.75□□□□□ -1.49
CLTCL1P53675 AC008694.2-201ENST00000517591 306 ntBASIC5.75□□□□□ -1.49
CLTCL1P53675 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.75□□□□□ -1.49
CLTCL1P53675 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.75□□□□□ -1.49
CLTCL1P53675 AC005255.1-201ENST00000593748 216 ntBASIC5.75□□□□□ -1.49
CLTCL1P53675 AC009093.8-201ENST00000641769 292 ntBASIC5.75□□□□□ -1.49
CLTCL1P53675 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLTCL1P53675 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.75□□□□□ -1.49
CLTCL1P53675 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLTCL1P53675 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLTCL1P53675 SNORA11.1-201ENST00000408133 129 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 SEPT7P8-201ENST00000413308 775 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 TRIM60P17-201ENST00000415181 719 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.74□□□□□ -1.49
CLTCL1P53675 YME1L1P1-201ENST00000429435 297 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.74□□□□□ -1.49
CLTCL1P53675 IGKV2D-19-201ENST00000523346 262 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.74□□□□□ -1.49
CLTCL1P53675 AL451044.1-201ENST00000604867 238 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 AL049634.3-201ENST00000604968 457 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 AC069200.1-201ENST00000609511 323 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 AC090246.1-201ENST00000616499 426 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CLTCL1P53675 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.74□□□□□ -1.49
CLTCL1P53675 Z97055.1-201ENST00000419730 712 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.74□□□□□ -1.49
CLTCL1P53675 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLTCL1P53675 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.74□□□□□ -1.49
CLTCL1P53675 RPS17P13-201ENST00000448974 407 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.74□□□□□ -1.49
CLTCL1P53675 PPIAP15-201ENST00000479662 484 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 RPL7P24-201ENST00000493052 752 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 AC025554.1-201ENST00000505641 188 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.74□□□□□ -1.49
CLTCL1P53675 SNX6P1-201ENST00000601728 1224 ntBASIC5.74□□□□□ -1.49
CLTCL1P53675 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.74□□□□□ -1.49
CLTCL1P53675 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.73□□□□□ -1.49
CLTCL1P53675 AC006042.3-201ENST00000454684 1469 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.73□□□□□ -1.49
CLTCL1P53675 CASC19-284ENST00000642142 1868 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLTCL1P53675 MIR30B-201ENST00000384850 88 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 RNA5SP372-201ENST00000390836 115 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.73□□□□□ -1.49
CLTCL1P53675 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLTCL1P53675 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.73□□□□□ -1.49
CLTCL1P53675 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.73□□□□□ -1.49
CLTCL1P53675 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.73□□□□□ -1.49
CLTCL1P53675 AC079171.1-201ENST00000568788 914 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 AC104662.1-201ENST00000604448 511 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLTCL1P53675 SNORA51-201ENST00000606420 132 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLTCL1P53675 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLTCL1P53675 AL121890.2-201ENST00000617644 465 ntBASIC5.73□□□□□ -1.49
CLTCL1P53675 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLTCL1P53675 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLTCL1P53675 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CLTCL1P53675 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLTCL1P53675 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLTCL1P53675 HSPD1P11-201ENST00000508643 1702 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLTCL1P53675 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.72□□□□□ -1.49
CLTCL1P53675 MARK2P15-201ENST00000432204 2186 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLTCL1P53675 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.72□□□□□ -1.49
CLTCL1P53675 AC068533.1-201ENST00000418542 415 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 Z74696.2-201ENST00000436514 498 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 RPL23AP89-201ENST00000439324 255 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.72□□□□□ -1.49
CLTCL1P53675 FABP3P2-201ENST00000453169 399 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 AC026726.1-201ENST00000512859 601 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 RN7SKP157-201ENST00000516174 282 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 FTH1P11-201ENST00000517577 551 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 AC025627.2-201ENST00000576220 160 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 AC026979.4-201ENST00000606555 645 ntBASIC5.72□□□□□ -1.49
CLTCL1P53675 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.72□□□□□ -1.49
CLTCL1P53675 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.72□□□□□ -1.49
CLTCL1P53675 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.72□□□□□ -1.49
CLTCL1P53675 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLTCL1P53675 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.72□□□□□ -1.49
CLTCL1P53675 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.72□□□□□ -1.49
CLTCL1P53675 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.72□□□□□ -1.49
CLTCL1P53675 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLTCL1P53675 Z95327.2-201ENST00000414579 1873 ntBASIC5.71□□□□□ -1.49
CLTCL1P53675 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CLTCL1P53675 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLTCL1P53675 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CLTCL1P53675 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CLTCL1P53675 SNORD35B-201ENST00000363660 87 ntBASIC5.71□□□□□ -1.5
CLTCL1P53675 AL590704.1-201ENST00000402856 794 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms