Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF144AP50876 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RNF144AP50876 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF144AP50876 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF144AP50876 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF144AP50876 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF144AP50876 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF144AP50876 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF144AP50876 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF144AP50876 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF144AP50876 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF144AP50876 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RNF144AP50876 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 AL049641.1-201ENST00000441055 1948 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RNF144AP50876 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
RNF144AP50876 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 ZNF807-201ENST00000328088 1707 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RNF144AP50876 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 SNORA70.5-201ENST00000365519 135 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RN7SKP1-201ENST00000365525 307 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 SET-203ENST00000372688 801 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF144AP50876 Y_RNA.414-201ENST00000384011 101 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RNU6-1032P-201ENST00000384100 107 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 Y_RNA.527-201ENST00000384573 102 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
RNF144AP50876 RPL31P52-201ENST00000407532 367 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RPS15AP12-201ENST00000419498 388 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 GSTA6P-201ENST00000424144 582 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 AL121916.1-201ENST00000429405 308 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF144AP50876 PRDX1P1-201ENST00000449329 596 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RBMY2EP-202ENST00000456360 940 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 ELOCP24-201ENST00000456370 334 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 SNORA35.1-201ENST00000458908 128 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 RPL23AP12-201ENST00000467573 473 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RN7SL145P-201ENST00000469955 296 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RPL23AP71-201ENST00000470966 469 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RN7SL563P-201ENST00000481233 298 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 AC004062.1-201ENST00000509926 645 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RNU6-976P-201ENST00000516086 111 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 SCARNA24.1-201ENST00000516465 137 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 AC009812.2-201ENST00000517657 457 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 IGLV1-62-201ENST00000518003 441 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF144AP50876 AF279873.1-201ENST00000523393 313 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF144AP50876 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF144AP50876 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF144AP50876 MIR1273F-201ENST00000580581 99 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 RN7SL697P-201ENST00000582484 299 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 AC061975.3-201ENST00000583209 244 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF144AP50876 AL391813.2-201ENST00000609113 322 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 AL121782.1-201ENST00000611242 413 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.54□□□□□ -1.36
RNF144AP50876 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RNF144AP50876 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
RNF144AP50876 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF144AP50876 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RNF144AP50876 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF144AP50876 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 AC007406.5-201ENST00000570140 3170 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF144AP50876 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
RNF144AP50876 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF144AP50876 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF144AP50876 RPL23AP57-201ENST00000332361 466 ntBASIC6.53□□□□□ -1.36
RNF144AP50876 RNU6-853P-201ENST00000364306 107 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms