Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.78□□□□□ -1.64
LHX1P48742 RNFT1P2-201ENST00000443064 757 ntBASIC4.78□□□□□ -1.64
LHX1P48742 EIF2S2P2-201ENST00000447161 982 ntBASIC4.78□□□□□ -1.64
LHX1P48742 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX1P48742 EIF2S2P5-201ENST00000457635 968 ntBASIC4.78□□□□□ -1.64
LHX1P48742 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.78□□□□□ -1.64
LHX1P48742 AC002456.2-201ENST00000509356 380 ntBASIC4.78□□□□□ -1.64
LHX1P48742 AC138938.1-201ENST00000515431 782 ntBASIC4.78□□□□□ -1.64
LHX1P48742 RNA5SP497-201ENST00000516081 97 ntBASIC4.78□□□□□ -1.64
LHX1P48742 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.78□□□□□ -1.64
LHX1P48742 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX1P48742 AC233702.9-201ENST00000581528 203 ntBASIC4.78□□□□□ -1.64
LHX1P48742 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX1P48742 AC015911.5-201ENST00000587076 451 ntBASIC4.78□□□□□ -1.64
LHX1P48742 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX1P48742 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX1P48742 AL136370.1-201ENST00000608166 691 ntBASIC4.78□□□□□ -1.64
LHX1P48742 AC097505.1-201ENST00000610199 565 ntBASIC4.78□□□□□ -1.64
LHX1P48742 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 AL121873.1-201ENST00000616013 524 ntBASIC4.78□□□□□ -1.64
LHX1P48742 AC234782.5-201ENST00000617723 324 ntBASIC4.78□□□□□ -1.64
LHX1P48742 TMEM30CP-203ENST00000637814 1035 ntBASIC4.78□□□□□ -1.64
LHX1P48742 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX1P48742 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX1P48742 SALL4P2-201ENST00000423288 2910 ntBASIC4.78□□□□□ -1.64
LHX1P48742 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LHX1P48742 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
LHX1P48742 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.77□□□□□ -1.65
LHX1P48742 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
LHX1P48742 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.77□□□□□ -1.65
LHX1P48742 AC139713.2-215ENST00000641428 5037 ntBASIC4.77□□□□□ -1.65
LHX1P48742 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LHX1P48742 ATP5F1P6-201ENST00000402768 767 ntBASIC4.77□□□□□ -1.65
LHX1P48742 XKRYP4-201ENST00000414395 483 ntBASIC4.77□□□□□ -1.65
LHX1P48742 TMSB10P2-201ENST00000416049 131 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.77□□□□□ -1.65
LHX1P48742 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.77□□□□□ -1.65
LHX1P48742 RPL21P91-201ENST00000429231 479 ntBASIC4.77□□□□□ -1.65
LHX1P48742 RPL23AP25-201ENST00000430973 463 ntBASIC4.77□□□□□ -1.65
LHX1P48742 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.77□□□□□ -1.65
LHX1P48742 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.77□□□□□ -1.65
LHX1P48742 RPL7P33-201ENST00000444159 742 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LHX1P48742 XKRYP5-201ENST00000449659 483 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC022431.1-201ENST00000450941 438 ntBASIC4.77□□□□□ -1.65
LHX1P48742 RPL23AP24-201ENST00000458203 385 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
LHX1P48742 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LHX1P48742 RN7SL810P-201ENST00000493031 276 ntBASIC4.77□□□□□ -1.65
LHX1P48742 MTCO2P9-201ENST00000503214 694 ntBASIC4.77□□□□□ -1.65
LHX1P48742 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.77□□□□□ -1.65
LHX1P48742 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.77□□□□□ -1.65
LHX1P48742 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.77□□□□□ -1.65
LHX1P48742 AC093840.1-201ENST00000511599 336 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.77□□□□□ -1.65
LHX1P48742 RPS27AP18-201ENST00000515536 459 ntBASIC4.77□□□□□ -1.65
LHX1P48742 RNU6-1004P-201ENST00000516584 111 ntBASIC4.77□□□□□ -1.65
LHX1P48742 UBTFL9-201ENST00000534504 1148 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.77□□□□□ -1.65
LHX1P48742 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LHX1P48742 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.77□□□□□ -1.65
LHX1P48742 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LHX1P48742 MIR4472-2-201ENST00000582069 67 ntBASIC4.77□□□□□ -1.65
LHX1P48742 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.77□□□□□ -1.65
LHX1P48742 AC005034.4-201ENST00000603612 899 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC079880.2-201ENST00000603790 1213 ntBASIC4.77□□□□□ -1.65
LHX1P48742 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.77□□□□□ -1.65
LHX1P48742 IMMP1LP1-201ENST00000605170 488 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC016542.1-201ENST00000608259 493 ntBASIC4.77□□□□□ -1.65
LHX1P48742 MIR378J-201ENST00000611988 109 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC011472.4-201ENST00000615848 491 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC253576.2-201ENST00000618815 580 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AP003400.6-201ENST00000624698 740 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AL138960.2-201ENST00000625145 535 ntBASIC4.77□□□□□ -1.65
LHX1P48742 OR2L1P-202ENST00000641567 1023 ntBASIC4.77□□□□□ -1.65
LHX1P48742 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LHX1P48742 AL133268.1-201ENST00000405676 1401 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AC139769.1-204ENST00000472297 1931 ntBASIC4.77□□□□□ -1.65
LHX1P48742 AL731566.1-201ENST00000620490 1937 ntBASIC4.77□□□□□ -1.65
LHX1P48742 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.77□□□□□ -1.65
LHX1P48742 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.77□□□□□ -1.65
LHX1P48742 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LHX1P48742 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LHX1P48742 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LHX1P48742 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LHX1P48742 MAPK10-303ENST00000641324 3959 ntBASIC4.76□□□□□ -1.65
LHX1P48742 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.76□□□□□ -1.65
LHX1P48742 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LHX1P48742 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX1P48742 RNU6-252P-201ENST00000363232 107 ntBASIC4.76□□□□□ -1.65
LHX1P48742 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LHX1P48742 RPS27AP11-201ENST00000402798 447 ntBASIC4.76□□□□□ -1.65
LHX1P48742 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.76□□□□□ -1.65
LHX1P48742 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.76□□□□□ -1.65
LHX1P48742 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.76□□□□□ -1.65
LHX1P48742 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms