Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNU6-225P-201ENST00000384613 103 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 VDAC2P1-201ENST00000399358 958 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 AL603865.2-201ENST00000401679 213 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 COX6B1P1-201ENST00000415962 213 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN9P43378 NANOGP5-201ENST00000424456 877 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 RPL34P6-201ENST00000432390 345 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 VN1R54P-201ENST00000435210 1049 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN9P43378 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN9P43378 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN9P43378 OR52J1P-201ENST00000450596 932 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN9P43378 RPL7P16-201ENST00000479738 738 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 RPL21P131-201ENST00000497298 483 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC111193.1-201ENST00000504097 155 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 AC093720.1-201ENST00000505681 714 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC119751.1-201ENST00000513357 765 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN9P43378 MIR5699-201ENST00000578903 90 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.02□□□□□ -1.61
PTPN9P43378 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC125494.3-201ENST00000602759 455 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 RNU4-5P-201ENST00000607255 135 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN9P43378 AC006840.1-201ENST00000623069 542 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN9P43378 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.02□□□□□ -1.61
PTPN9P43378 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN9P43378 AL133268.1-201ENST00000405676 1401 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 SAMMSON-226ENST00000642089 1582 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 ZFRP1-201ENST00000457579 2970 ntBASIC5.02□□□□□ -1.61
PTPN9P43378 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PTPN9P43378 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.02□□□□□ -1.61
PTPN9P43378 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN9P43378 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PTPN9P43378 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTPN9P43378 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN9P43378 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 AC073055.1-201ENST00000456901 1621 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 SMG1P4-204ENST00000523028 4131 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
PTPN9P43378 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN9P43378 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTPN9P43378 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
PTPN9P43378 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN9P43378 ZNF29P-201ENST00000225587 168 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN9P43378 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTPN9P43378 RN7SKP149-201ENST00000363008 344 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PTPN9P43378 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 RNU6-549P-201ENST00000384433 107 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AL645733.1-201ENST00000402250 217 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AP000580.1-201ENST00000404439 358 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.01□□□□□ -1.61
PTPN9P43378 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.01□□□□□ -1.61
PTPN9P43378 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.01□□□□□ -1.61
PTPN9P43378 OR51A6P-201ENST00000418680 1004 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 E2F6P2-201ENST00000420708 748 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.01□□□□□ -1.61
PTPN9P43378 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.01□□□□□ -1.61
PTPN9P43378 NMNAT1P2-201ENST00000435192 860 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 FTH1P16-201ENST00000435241 552 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.01□□□□□ -1.61
PTPN9P43378 RPL7P29-201ENST00000437151 728 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 PTGES3P1-201ENST00000439531 483 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC092170.1-201ENST00000440211 356 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC002542.1-201ENST00000440683 193 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AL592437.1-201ENST00000443781 492 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.01□□□□□ -1.61
PTPN9P43378 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.01□□□□□ -1.61
PTPN9P43378 RPS5P7-201ENST00000456664 608 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 RPL7P48-201ENST00000461513 746 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 RPL21P6-201ENST00000479171 504 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC098862.1-201ENST00000504991 413 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PTPN9P43378 Y_RNA.717-201ENST00000517106 92 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 AC026407.1-201ENST00000518369 204 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC018442.3-201ENST00000523025 183 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AC104417.1-201ENST00000523974 751 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 LRRC6P1-201ENST00000532188 885 ntBASIC5.01□□□□□ -1.61
PTPN9P43378 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.01□□□□□ -1.61
PTPN9P43378 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.01□□□□□ -1.61
PTPN9P43378 AC009117.1-201ENST00000563948 554 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms