Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HTTP42858 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 NACA3P-201ENST00000359690 648 ntBASIC4.3□□□□□ -1.72
HTTP42858 SNORD66.1-201ENST00000391230 76 ntBASIC4.3□□□□□ -1.72
HTTP42858 ATP5JP1-201ENST00000431631 322 ntBASIC4.3□□□□□ -1.72
HTTP42858 RPS17P13-201ENST00000448974 407 ntBASIC4.3□□□□□ -1.72
HTTP42858 AC006511.1-201ENST00000470614 315 ntBASIC4.3□□□□□ -1.72
HTTP42858 RPS27AP1-201ENST00000475545 471 ntBASIC4.3□□□□□ -1.72
HTTP42858 AC022695.1-201ENST00000522089 237 ntBASIC4.3□□□□□ -1.72
HTTP42858 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 AC124068.1-201ENST00000563131 678 ntBASIC4.3□□□□□ -1.72
HTTP42858 AC013412.1-201ENST00000610687 192 ntBASIC4.3□□□□□ -1.72
HTTP42858 AC019278.1-201ENST00000623516 479 ntBASIC4.3□□□□□ -1.72
HTTP42858 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HTTP42858 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HTTP42858 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HTTP42858 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.3□□□□□ -1.72
HTTP42858 PHBP14-201ENST00000512887 367 ntBASIC4.3□□□□□ -1.72
HTTP42858 AC010342.1-201ENST00000514047 877 ntBASIC4.3□□□□□ -1.72
HTTP42858 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HTTP42858 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 RPL23AP57-201ENST00000332361 466 ntBASIC4.29□□□□□ -1.72
HTTP42858 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 RPL7P60-201ENST00000397636 735 ntBASIC4.29□□□□□ -1.72
HTTP42858 AP001992.1-205ENST00000462248 379 ntBASIC4.29□□□□□ -1.72
HTTP42858 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.29□□□□□ -1.72
HTTP42858 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
HTTP42858 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HTTP42858 UBA52P6-201ENST00000399822 382 ntBASIC4.29□□□□□ -1.72
HTTP42858 AL161631.1-201ENST00000417933 486 ntBASIC4.29□□□□□ -1.72
HTTP42858 AC025750.2-201ENST00000442609 450 ntBASIC4.29□□□□□ -1.72
HTTP42858 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.29□□□□□ -1.72
HTTP42858 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.29□□□□□ -1.72
HTTP42858 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.29□□□□□ -1.72
HTTP42858 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC4.29□□□□□ -1.72
HTTP42858 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 AC139426.3-201ENST00000605648 2059 ntBASIC4.29□□□□□ -1.72
HTTP42858 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
HTTP42858 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC4.29□□□□□ -1.72
HTTP42858 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.29□□□□□ -1.72
HTTP42858 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.29□□□□□ -1.72
HTTP42858 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HTTP42858 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.28□□□□□ -1.72
HTTP42858 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.28□□□□□ -1.72
HTTP42858 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.28□□□□□ -1.72
HTTP42858 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
HTTP42858 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HTTP42858 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.28□□□□□ -1.72
HTTP42858 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 MFSD8-242ENST00000641690 4199 ntBASIC4.28□□□□□ -1.72
HTTP42858 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 BTF3P5-201ENST00000457252 467 ntBASIC4.28□□□□□ -1.72
HTTP42858 SNORD105B-201ENST00000458770 79 ntBASIC4.28□□□□□ -1.72
HTTP42858 RNA5SP249-201ENST00000516127 99 ntBASIC4.28□□□□□ -1.72
HTTP42858 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.28□□□□□ -1.72
HTTP42858 MIR5680-201ENST00000577577 84 ntBASIC4.28□□□□□ -1.72
HTTP42858 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 TTC3P1-201ENST00000399586 6081 ntBASIC4.28□□□□□ -1.72
HTTP42858 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HTTP42858 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 RNA5SP97-201ENST00000365006 84 ntBASIC4.28□□□□□ -1.72
HTTP42858 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HTTP42858 TMED11P-201ENST00000479478 690 ntBASIC4.28□□□□□ -1.72
HTTP42858 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.28□□□□□ -1.72
HTTP42858 AL359757.2-201ENST00000624309 274 ntBASIC4.28□□□□□ -1.72
HTTP42858 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.28□□□□□ -1.72
HTTP42858 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HTTP42858 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.27□□□□□ -1.73
HTTP42858 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.27□□□□□ -1.73
HTTP42858 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HTTP42858 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.27□□□□□ -1.73
HTTP42858 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.27□□□□□ -1.73
HTTP42858 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.27□□□□□ -1.73
HTTP42858 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.27□□□□□ -1.73
HTTP42858 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms