Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR1303-201ENST00000408625 86 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.68□□□□□ -1.66
HNF4AP41235 RNU2-6P-201ENST00000411404 190 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.68□□□□□ -1.66
HNF4AP41235 VN1R37P-201ENST00000419096 748 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 OR2AM1P-201ENST00000422137 422 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.68□□□□□ -1.66
HNF4AP41235 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.68□□□□□ -1.66
HNF4AP41235 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.68□□□□□ -1.66
HNF4AP41235 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
HNF4AP41235 RPL7P11-201ENST00000437586 658 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AC074367.1-201ENST00000438685 1125 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 RPS27P5-201ENST00000444247 244 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 YWHAQP9-201ENST00000445891 512 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 SLC25A18P1-201ENST00000449385 454 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 RPL7P61-201ENST00000451721 751 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.68□□□□□ -1.66
HNF4AP41235 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.68□□□□□ -1.66
HNF4AP41235 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.68□□□□□ -1.66
HNF4AP41235 AC096992.1-201ENST00000459808 709 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 NPM1P17-201ENST00000479221 602 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.68□□□□□ -1.66
HNF4AP41235 MORF4L1P3-201ENST00000525966 950 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AP003049.1-201ENST00000529418 457 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.68□□□□□ -1.66
HNF4AP41235 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.68□□□□□ -1.66
HNF4AP41235 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.68□□□□□ -1.66
HNF4AP41235 LINC00557-201ENST00000563184 1279 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.68□□□□□ -1.66
HNF4AP41235 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.68□□□□□ -1.66
HNF4AP41235 BNIP3P39-201ENST00000601077 554 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AL121932.1-201ENST00000605542 214 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 SNORD91B-202ENST00000608459 222 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AL035461.2-201ENST00000619201 524 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AC068870.2-201ENST00000620635 389 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AL445487.1-201ENST00000415694 1580 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HNF4AP41235 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 AL136964.1-201ENST00000622038 2990 ntBASIC4.68□□□□□ -1.66
HNF4AP41235 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HNF4AP41235 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HNF4AP41235 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.67□□□□□ -1.66
HNF4AP41235 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HNF4AP41235 AL512283.1-201ENST00000606756 1384 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
HNF4AP41235 AL672167.1-205ENST00000641112 3080 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 SAMMSON-226ENST00000642089 1582 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 INTS6P1-201ENST00000504674 2530 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HNF4AP41235 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.67□□□□□ -1.66
HNF4AP41235 RNU2-65P-201ENST00000410162 185 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 HSFY1P1-201ENST00000423928 1178 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 PTP4A1P3-201ENST00000433661 420 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.67□□□□□ -1.66
HNF4AP41235 MTCYBP21-201ENST00000443300 1113 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.67□□□□□ -1.66
HNF4AP41235 OTX2P1-201ENST00000450956 354 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC234781.3-201ENST00000452540 973 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 RPL23AP56-201ENST00000460778 453 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 TRBV8-2-201ENST00000475637 270 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC008628.1-201ENST00000508663 265 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC106806.2-201ENST00000509365 500 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HNF4AP41235 OR5AK3P-201ENST00000527486 1297 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 GCSHP4-201ENST00000538792 439 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.67□□□□□ -1.66
HNF4AP41235 CR383656.14-201ENST00000551951 406 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.67□□□□□ -1.66
HNF4AP41235 AL049839.1-201ENST00000556151 657 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.67□□□□□ -1.66
HNF4AP41235 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.67□□□□□ -1.66
HNF4AP41235 MIR4646-201ENST00000580775 63 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 RN7SL52P-201ENST00000584271 284 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.67□□□□□ -1.66
HNF4AP41235 AC011487.3-201ENST00000593607 453 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC098483.2-201ENST00000603158 454 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AL392112.1-201ENST00000605115 829 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AL353600.1-201ENST00000608148 251 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
HNF4AP41235 AL022401.1-201ENST00000619498 108 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.67□□□□□ -1.66
HNF4AP41235 FRG1DP-201ENST00000635586 771 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AL590396.2-201ENST00000636511 1041 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC083865.1-201ENST00000636634 831 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC106858.1-201ENST00000637497 429 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 AC025125.1-201ENST00000624743 1922 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HNF4AP41235 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HNF4AP41235 AC131971.1-201ENST00000332881 1482 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.67□□□□□ -1.66
HNF4AP41235 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.67□□□□□ -1.66
HNF4AP41235 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.67□□□□□ -1.66
HNF4AP41235 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HNF4AP41235 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.66□□□□□ -1.66
HNF4AP41235 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
HNF4AP41235 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms