Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RFC4P35249 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFC4P35249 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC4P35249 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFC4P35249 AC016588.2-201ENST00000632484 3021 ntBASIC5.36□□□□□ -1.55
RFC4P35249 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC4P35249 AL607077.1-201ENST00000401718 499 ntBASIC5.36□□□□□ -1.55
RFC4P35249 Z74021.1-201ENST00000423610 407 ntBASIC5.36□□□□□ -1.55
RFC4P35249 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFC4P35249 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC4P35249 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC4P35249 RNA5SP246-201ENST00000458909 119 ntBASIC5.36□□□□□ -1.55
RFC4P35249 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC4P35249 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC4P35249 AL121839.1-201ENST00000556233 1185 ntBASIC5.36□□□□□ -1.55
RFC4P35249 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFC4P35249 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC4P35249 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
RFC4P35249 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC4P35249 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC4P35249 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC4P35249 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 RNU1-83P-201ENST00000363426 164 ntBASIC5.35□□□□□ -1.55
RFC4P35249 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RFC4P35249 VDAC2P1-201ENST00000399358 958 ntBASIC5.35□□□□□ -1.55
RFC4P35249 AL592291.1-201ENST00000403830 352 ntBASIC5.35□□□□□ -1.55
RFC4P35249 HMGB3P10-201ENST00000434734 572 ntBASIC5.35□□□□□ -1.55
RFC4P35249 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 RPL23AP46-201ENST00000438548 490 ntBASIC5.35□□□□□ -1.55
RFC4P35249 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC4P35249 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 AC006499.6-201ENST00000511169 607 ntBASIC5.35□□□□□ -1.55
RFC4P35249 RFPL4AP5-201ENST00000514977 504 ntBASIC5.35□□□□□ -1.55
RFC4P35249 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 AC109635.6-201ENST00000525487 1113 ntBASIC5.35□□□□□ -1.55
RFC4P35249 OR10D4P-201ENST00000525892 951 ntBASIC5.35□□□□□ -1.55
RFC4P35249 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 AC120057.2-201ENST00000571520 271 ntBASIC5.35□□□□□ -1.55
RFC4P35249 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.35□□□□□ -1.55
RFC4P35249 AP003499.2-201ENST00000624100 483 ntBASIC5.35□□□□□ -1.55
RFC4P35249 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 AC008013.2-202ENST00000637965 364 ntBASIC5.35□□□□□ -1.55
RFC4P35249 MAPK10-286ENST00000641208 8747 ntBASIC5.35□□□□□ -1.55
RFC4P35249 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFC4P35249 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC4P35249 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.35□□□□□ -1.55
RFC4P35249 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.35□□□□□ -1.55
RFC4P35249 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC4P35249 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFC4P35249 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFC4P35249 USP9YP4-201ENST00000424401 1745 ntBASIC5.34□□□□□ -1.55
RFC4P35249 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC4P35249 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.34□□□□□ -1.55
RFC4P35249 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC4P35249 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFC4P35249 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.34□□□□□ -1.55
RFC4P35249 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFC4P35249 RNA5SP307-201ENST00000362863 116 ntBASIC5.34□□□□□ -1.55
RFC4P35249 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RFC4P35249 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC4P35249 RNU4-6P-201ENST00000410804 122 ntBASIC5.34□□□□□ -1.55
RFC4P35249 TPT1P2-201ENST00000413105 503 ntBASIC5.34□□□□□ -1.55
RFC4P35249 VN1R31P-201ENST00000417498 730 ntBASIC5.34□□□□□ -1.55
RFC4P35249 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.34□□□□□ -1.55
RFC4P35249 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 AL138787.1-202ENST00000437804 898 ntBASIC5.34□□□□□ -1.55
RFC4P35249 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC4P35249 AC110792.1-201ENST00000491826 472 ntBASIC5.34□□□□□ -1.55
RFC4P35249 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFC4P35249 AC068993.1-201ENST00000546724 589 ntBASIC5.34□□□□□ -1.55
RFC4P35249 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC4P35249 AC017100.2-201ENST00000584628 355 ntBASIC5.34□□□□□ -1.55
RFC4P35249 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.34□□□□□ -1.55
RFC4P35249 Z98200.1-201ENST00000607298 470 ntBASIC5.34□□□□□ -1.55
RFC4P35249 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC4P35249 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.34□□□□□ -1.55
RFC4P35249 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.34□□□□□ -1.55
RFC4P35249 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFC4P35249 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFC4P35249 AC007546.2-201ENST00000623996 360 ntBASIC5.34□□□□□ -1.55
RFC4P35249 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFC4P35249 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFC4P35249 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFC4P35249 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RFC4P35249 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.34□□□□□ -1.56
RFC4P35249 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms