Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CFTRP2-201ENST00000634304 199 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.38□□□□□ -1.71
PTPN6P29350 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTPN6P29350 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN6P29350 OR14L1P-202ENST00000641545 3009 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC017104.4-201ENST00000636283 1592 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN6P29350 RNU6-185P-201ENST00000384421 107 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 ATP5F1P2-201ENST00000398143 760 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 RNA5SP146-201ENST00000410743 123 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 RSU1P3-201ENST00000412878 835 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 MTND4P24-201ENST00000424002 397 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 IPMKP1-201ENST00000425988 855 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 NIPA2P1-201ENST00000426223 976 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 ZNF965P-201ENST00000432501 817 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AL031663.1-201ENST00000437445 219 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AC005154.2-201ENST00000438110 379 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN6P29350 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPN6P29350 TPMTP4-201ENST00000450749 678 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 HMGB1P5-202ENST00000451497 985 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 RPL23AP65-201ENST00000475608 468 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AC011005.3-201ENST00000491624 395 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 RPL36AP41-201ENST00000493820 306 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN6P29350 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC090151.1-201ENST00000520784 730 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 SOX5P1-201ENST00000524155 1127 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC022882.1-201ENST00000532142 501 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN6P29350 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPN6P29350 AL731537.2-201ENST00000561565 951 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AC027455.1-201ENST00000574104 594 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPN6P29350 RN7SL52P-201ENST00000584271 284 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.37□□□□□ -1.71
PTPN6P29350 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC090525.3-201ENST00000605601 189 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AC015849.2-201ENST00000605738 409 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AC110792.4-201ENST00000609843 298 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 MIR7973-1-201ENST00000614683 76 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AL023881.1-201ENST00000621088 301 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 AL356490.1-201ENST00000623079 479 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 AC116563.2-201ENST00000624751 535 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 CCT8P1-201ENST00000413611 1657 ntBASIC4.37□□□□□ -1.71
PTPN6P29350 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN6P29350 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPN6P29350 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
PTPN6P29350 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN6P29350 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
PTPN6P29350 MAPK10-286ENST00000641208 8747 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PTPN6P29350 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN6P29350 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
PTPN6P29350 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN6P29350 SNORD51.1-201ENST00000365405 77 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN6P29350 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN6P29350 AL591848.1-201ENST00000413092 322 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN6P29350 BTBD7P2-201ENST00000441962 620 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN6P29350 RPL36AP15-201ENST00000444514 266 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN6P29350 AC006967.1-201ENST00000467608 589 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AC093663.2-201ENST00000484625 313 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN6P29350 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN6P29350 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPN6P29350 CKS1BP1-201ENST00000555221 240 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN6P29350 AC090181.2-201ENST00000602975 672 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 SUMO2P14-201ENST00000604488 293 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN6P29350 AC010201.1-201ENST00000605051 540 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN6P29350 AP002360.3-201ENST00000607673 710 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 AL161616.1-201ENST00000611867 286 ntBASIC4.36□□□□□ -1.71
PTPN6P29350 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPN6P29350 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPN6P29350 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN6P29350 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN6P29350 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN6P29350 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPN6P29350 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN6P29350 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN6P29350 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms