Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.23□□□□□ -1.57
CD40P25942 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 MAGOH2P-202ENST00000584384 429 ntBASIC5.23□□□□□ -1.57
CD40P25942 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.23□□□□□ -1.57
CD40P25942 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.23□□□□□ -1.57
CD40P25942 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AC112187.2-201ENST00000604345 283 ntBASIC5.23□□□□□ -1.57
CD40P25942 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AC097468.3-201ENST00000607956 456 ntBASIC5.23□□□□□ -1.57
CD40P25942 AL359535.1-201ENST00000612100 1087 ntBASIC5.23□□□□□ -1.57
CD40P25942 MIR6809-201ENST00000612189 116 ntBASIC5.23□□□□□ -1.57
CD40P25942 AL121890.2-201ENST00000617644 465 ntBASIC5.23□□□□□ -1.57
CD40P25942 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.23□□□□□ -1.57
CD40P25942 AL603839.4-201ENST00000624658 1005 ntBASIC5.23□□□□□ -1.57
CD40P25942 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 AL355377.1-201ENST00000621125 1653 ntBASIC5.23□□□□□ -1.57
CD40P25942 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 AL161901.1-201ENST00000624954 3425 ntBASIC5.23□□□□□ -1.57
CD40P25942 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.23□□□□□ -1.57
CD40P25942 DCAF13P1-201ENST00000495256 1330 ntBASIC5.23□□□□□ -1.57
CD40P25942 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CD40P25942 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CD40P25942 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 AP000756.2-201ENST00000624168 2567 ntBASIC5.22□□□□□ -1.57
CD40P25942 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40P25942 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40P25942 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40P25942 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 OR10R3P-201ENST00000361688 942 ntBASIC5.22□□□□□ -1.57
CD40P25942 RNA5SP510-201ENST00000364697 99 ntBASIC5.22□□□□□ -1.57
CD40P25942 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CD40P25942 RNU6-259P-201ENST00000383999 107 ntBASIC5.22□□□□□ -1.57
CD40P25942 RNU6-1293P-201ENST00000384077 107 ntBASIC5.22□□□□□ -1.57
CD40P25942 RNU6-297P-201ENST00000384636 107 ntBASIC5.22□□□□□ -1.57
CD40P25942 SNRPEP6-201ENST00000407465 277 ntBASIC5.22□□□□□ -1.57
CD40P25942 MIR320C1-201ENST00000408566 88 ntBASIC5.22□□□□□ -1.57
CD40P25942 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 AC099336.2-201ENST00000422457 254 ntBASIC5.22□□□□□ -1.57
CD40P25942 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 RPL23AP16-201ENST00000441715 421 ntBASIC5.22□□□□□ -1.57
CD40P25942 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 NANOGNBP1-201ENST00000448444 480 ntBASIC5.22□□□□□ -1.57
CD40P25942 AC112187.1-201ENST00000455837 479 ntBASIC5.22□□□□□ -1.57
CD40P25942 SNRPFP4-201ENST00000456366 242 ntBASIC5.22□□□□□ -1.57
CD40P25942 AC099560.2-201ENST00000457554 255 ntBASIC5.22□□□□□ -1.57
CD40P25942 SNORD42A-201ENST00000459584 64 ntBASIC5.22□□□□□ -1.57
CD40P25942 RN7SL352P-201ENST00000466002 277 ntBASIC5.22□□□□□ -1.57
CD40P25942 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.22□□□□□ -1.57
CD40P25942 AC074386.1-201ENST00000476560 767 ntBASIC5.22□□□□□ -1.57
CD40P25942 TMEM251P1-201ENST00000503717 318 ntBASIC5.22□□□□□ -1.57
CD40P25942 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40P25942 POU5F1P7-201ENST00000508759 541 ntBASIC5.22□□□□□ -1.57
CD40P25942 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CD40P25942 PAICSP4-201ENST00000517543 1253 ntBASIC5.22□□□□□ -1.57
CD40P25942 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.22□□□□□ -1.57
CD40P25942 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.22□□□□□ -1.57
CD40P25942 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 LARP7P2-201ENST00000575306 125 ntBASIC5.22□□□□□ -1.57
CD40P25942 MIR5697-201ENST00000578045 78 ntBASIC5.22□□□□□ -1.57
CD40P25942 MIR4776-2-201ENST00000580204 80 ntBASIC5.22□□□□□ -1.57
CD40P25942 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.22□□□□□ -1.57
CD40P25942 NF1P5-201ENST00000588287 448 ntBASIC5.22□□□□□ -1.57
CD40P25942 AL136131.3-201ENST00000607600 188 ntBASIC5.22□□□□□ -1.57
CD40P25942 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.22□□□□□ -1.57
CD40P25942 AC078899.5-201ENST00000612475 178 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms