Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH3P22223 AL445487.1-201ENST00000415694 1580 ntBASIC4.66□□□□□ -1.66
CDH3P22223 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH3P22223 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH3P22223 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH3P22223 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH3P22223 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH3P22223 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH3P22223 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH3P22223 RNA5SP345-201ENST00000410646 108 ntBASIC4.66□□□□□ -1.66
CDH3P22223 RN7SKP100-201ENST00000411258 284 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH3P22223 OR2B7P-201ENST00000429302 934 ntBASIC4.66□□□□□ -1.66
CDH3P22223 MTCO3P21-201ENST00000430791 643 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AL512637.2-201ENST00000431287 1256 ntBASIC4.66□□□□□ -1.66
CDH3P22223 HSFY7P-201ENST00000432672 318 ntBASIC4.66□□□□□ -1.66
CDH3P22223 HSFY8P-201ENST00000437934 318 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH3P22223 AC023512.1-201ENST00000444513 499 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH3P22223 HSFY5P-201ENST00000453726 309 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH3P22223 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH3P22223 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH3P22223 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH3P22223 SYT14P1-201ENST00000481459 721 ntBASIC4.66□□□□□ -1.66
CDH3P22223 HMGB3P13-201ENST00000511263 607 ntBASIC4.66□□□□□ -1.66
CDH3P22223 RNA5SP392-201ENST00000516905 112 ntBASIC4.66□□□□□ -1.66
CDH3P22223 RNU6-334P-201ENST00000517072 102 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH3P22223 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CDH3P22223 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH3P22223 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH3P22223 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH3P22223 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH3P22223 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH3P22223 AGGF1P9-201ENST00000561884 913 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH3P22223 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH3P22223 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH3P22223 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH3P22223 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH3P22223 AC005034.4-201ENST00000603612 899 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AP001033.2-201ENST00000609701 1003 ntBASIC4.66□□□□□ -1.66
CDH3P22223 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH3P22223 AL022401.1-201ENST00000619498 108 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AC145207.9-201ENST00000623802 325 ntBASIC4.66□□□□□ -1.66
CDH3P22223 AC087190.4-201ENST00000574616 8334 ntBASIC4.66□□□□□ -1.66
CDH3P22223 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH3P22223 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH3P22223 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH3P22223 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH3P22223 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH3P22223 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CDH3P22223 MTCO1P4-201ENST00000520516 1409 ntBASIC4.65□□□□□ -1.66
CDH3P22223 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH3P22223 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CDH3P22223 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
CDH3P22223 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH3P22223 AC012618.3-205ENST00000637896 1496 ntBASIC4.65□□□□□ -1.66
CDH3P22223 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH3P22223 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH3P22223 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDH3P22223 MIR708-201ENST00000390708 88 ntBASIC4.65□□□□□ -1.67
CDH3P22223 U3.30-201ENST00000391308 210 ntBASIC4.65□□□□□ -1.67
CDH3P22223 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH3P22223 MIR298-201ENST00000401212 88 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AP000580.1-201ENST00000404439 358 ntBASIC4.65□□□□□ -1.67
CDH3P22223 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.65□□□□□ -1.67
CDH3P22223 RNU4-74P-201ENST00000411280 161 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 AL160275.2-201ENST00000412010 394 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 AL158050.1-201ENST00000416077 457 ntBASIC4.65□□□□□ -1.67
CDH3P22223 FABP7P1-201ENST00000424004 391 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH3P22223 AL160175.1-201ENST00000428124 247 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH3P22223 MOB1AP2-201ENST00000446060 614 ntBASIC4.65□□□□□ -1.67
CDH3P22223 RPS5P7-201ENST00000456664 608 ntBASIC4.65□□□□□ -1.67
CDH3P22223 RNU6-1218P-201ENST00000458990 108 ntBASIC4.65□□□□□ -1.67
CDH3P22223 RPS29P22-201ENST00000472363 168 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC107398.1-201ENST00000486904 505 ntBASIC4.65□□□□□ -1.67
CDH3P22223 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 AC112198.4-201ENST00000515450 351 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH3P22223 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH3P22223 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH3P22223 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH3P22223 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH3P22223 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.65□□□□□ -1.67
CDH3P22223 CR383656.6-201ENST00000550518 394 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC063949.1-201ENST00000552900 865 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH3P22223 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.65□□□□□ -1.67
CDH3P22223 AC022726.1-201ENST00000587475 207 ntBASIC4.65□□□□□ -1.67
CDH3P22223 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms