Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KCNA3P22001 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.82□□□□□ -1.48
KCNA3P22001 MIR670-201ENST00000390142 98 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 NPM1P38-201ENST00000403835 865 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 SNORA11F-201ENST00000408237 128 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.82□□□□□ -1.48
KCNA3P22001 AL445183.3-201ENST00000414168 502 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 TMSB10P2-201ENST00000416049 131 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 QRSL1P2-201ENST00000418582 964 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AC008173.1-201ENST00000418901 264 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AL035246.1-201ENST00000433554 1255 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 RN7SL542P-201ENST00000467147 294 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KCNA3P22001 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.82□□□□□ -1.48
KCNA3P22001 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KCNA3P22001 AC093534.1-201ENST00000504977 132 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AC020699.1-201ENST00000505161 445 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AC021193.1-201ENST00000511607 420 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KCNA3P22001 SNORA19.3-201ENST00000516165 130 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 RNA5SP143-201ENST00000516936 115 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.82□□□□□ -1.48
KCNA3P22001 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.82□□□□□ -1.48
KCNA3P22001 AC139103.1-201ENST00000534696 1030 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.82□□□□□ -1.48
KCNA3P22001 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.82□□□□□ -1.48
KCNA3P22001 AC106734.1-201ENST00000568646 663 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.82□□□□□ -1.48
KCNA3P22001 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.82□□□□□ -1.48
KCNA3P22001 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.82□□□□□ -1.48
KCNA3P22001 SNX6P1-201ENST00000601728 1224 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AC067838.1-201ENST00000606064 577 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 AL157392.4-201ENST00000609756 345 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 U3.53-201ENST00000628922 216 ntBASIC5.82□□□□□ -1.48
KCNA3P22001 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
KCNA3P22001 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
KCNA3P22001 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
KCNA3P22001 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
KCNA3P22001 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
KCNA3P22001 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KCNA3P22001 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.81□□□□□ -1.48
KCNA3P22001 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 SNORA73.1-201ENST00000363107 205 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 OR1L6-202ENST00000373684 1044 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AC011933.1-201ENST00000413334 321 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 MTATP6P20-201ENST00000414147 562 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.81□□□□□ -1.48
KCNA3P22001 DEFB130D-201ENST00000426866 237 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 MTND2P5-201ENST00000432656 1006 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.81□□□□□ -1.48
KCNA3P22001 AC023271.1-201ENST00000445936 1090 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.81□□□□□ -1.48
KCNA3P22001 MTCYBP11-201ENST00000447254 1109 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 MTND1P31-201ENST00000449206 961 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.81□□□□□ -1.48
KCNA3P22001 AC116533.1-201ENST00000459748 321 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.81□□□□□ -1.48
KCNA3P22001 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.81□□□□□ -1.48
KCNA3P22001 RN7SL810P-201ENST00000493031 276 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 RPS26P24-201ENST00000497656 331 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.81□□□□□ -1.48
KCNA3P22001 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.81□□□□□ -1.48
KCNA3P22001 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.81□□□□□ -1.48
KCNA3P22001 AC022884.2-201ENST00000578535 580 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 RN7SL176P-201ENST00000580352 264 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 MIR4660-201ENST00000583549 74 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.81□□□□□ -1.48
KCNA3P22001 AC084373.1-201ENST00000603311 235 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 SUMO2P14-201ENST00000604488 293 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AC093673.2-201ENST00000609674 331 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.81□□□□□ -1.48
KCNA3P22001 AC068057.2-201ENST00000624047 895 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AP000676.4-201ENST00000624659 623 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 AC092159.4-201ENST00000624944 550 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
KCNA3P22001 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.81□□□□□ -1.48
KCNA3P22001 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.81□□□□□ -1.48
KCNA3P22001 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 AC092111.2-201ENST00000611627 1414 ntBASIC5.81□□□□□ -1.48
KCNA3P22001 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
KCNA3P22001 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KCNA3P22001 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
KCNA3P22001 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KCNA3P22001 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
KCNA3P22001 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
KCNA3P22001 RNA5SP366-201ENST00000365454 123 ntBASIC5.8□□□□□ -1.48
KCNA3P22001 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
KCNA3P22001 SNORA48.4-201ENST00000391089 134 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms