Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.45□□□□□ -1.22
COL9A1P20849 RNA5SP308-201ENST00000362532 115 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 RNA5SP510-201ENST00000364697 99 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 RNU2-6P-201ENST00000411404 190 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AC236972.1-201ENST00000433225 199 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC7.45□□□□□ -1.22
COL9A1P20849 AL359265.2-201ENST00000434367 631 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AC244505.2-201ENST00000435089 759 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 TIMM9P1-201ENST00000436122 256 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 SUMO2P3-201ENST00000438311 288 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 AL162388.1-201ENST00000450912 352 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 GAS5-223ENST00000452197 483 ntTSL 3 BASIC7.45□□□□□ -1.22
COL9A1P20849 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.45□□□□□ -1.22
COL9A1P20849 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.45□□□□□ -1.22
COL9A1P20849 UOX-201ENST00000471089 899 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 RN7SL362P-201ENST00000494228 267 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.45□□□□□ -1.22
COL9A1P20849 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 HIGD1AP13-201ENST00000509878 289 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 Y_RNA.715-201ENST00000517082 110 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 HIGD1AP5-201ENST00000529959 259 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.45□□□□□ -1.22
COL9A1P20849 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 SETP7-201ENST00000552169 453 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL9A1P20849 SNORD39.3-201ENST00000584451 71 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC7.45□□□□□ -1.22
COL9A1P20849 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.45□□□□□ -1.22
COL9A1P20849 AC009779.6-201ENST00000603972 165 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 MTND4LP5-201ENST00000605152 292 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.45□□□□□ -1.22
COL9A1P20849 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC7.45□□□□□ -1.22
COL9A1P20849 AC022467.1-201ENST00000614738 749 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 AL731566.2-201ENST00000618971 317 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 U6.114-201ENST00000636407 96 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 MTND5P6-201ENST00000422338 1798 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.45□□□□□ -1.22
COL9A1P20849 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 AC244517.1-201ENST00000606030 2086 ntBASIC7.45□□□□□ -1.22
COL9A1P20849 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
COL9A1P20849 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
COL9A1P20849 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
COL9A1P20849 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
COL9A1P20849 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.44□□□□□ -1.22
COL9A1P20849 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 OR8B9P-202ENST00000642028 5216 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 IPO7P2-201ENST00000451446 1750 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.44□□□□□ -1.22
COL9A1P20849 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC7.44□□□□□ -1.22
COL9A1P20849 RMST-202ENST00000541282 2099 ntTSL 2 BASIC7.44□□□□□ -1.22
COL9A1P20849 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
COL9A1P20849 RNU6-1159P-201ENST00000362933 107 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 Y_RNA.222-201ENST00000364264 102 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 U3.11-201ENST00000364476 212 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 RNY3P13-201ENST00000365542 102 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 SNORD14.1-201ENST00000365609 90 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 RNU6-641P-201ENST00000384006 107 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 MIR450B-201ENST00000401182 78 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 AL359643.1-201ENST00000404109 423 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 RPS17P17-201ENST00000419392 409 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.44□□□□□ -1.22
COL9A1P20849 USMG5P1-201ENST00000425964 177 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 AL132765.1-201ENST00000434165 553 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC7.44□□□□□ -1.22
COL9A1P20849 AL035090.1-201ENST00000454835 332 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 AC133473.1-201ENST00000455173 299 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 MTCO3P2-201ENST00000457365 171 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
COL9A1P20849 UBA52P3-201ENST00000491303 382 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.44□□□□□ -1.22
COL9A1P20849 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC7.44□□□□□ -1.22
COL9A1P20849 AC109481.1-201ENST00000509173 282 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 RNU6-189P-201ENST00000516120 101 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
COL9A1P20849 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC7.44□□□□□ -1.22
COL9A1P20849 HSPE1P2-201ENST00000554777 306 ntBASIC7.44□□□□□ -1.22
COL9A1P20849 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.44□□□□□ -1.22
COL9A1P20849 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms