Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 IGBP1P3-201ENST00000447449 1000 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 EPS15P1-201ENST00000448836 336 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC3P19447 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 EIF3LP3-201ENST00000495197 822 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 NENFP3-201ENST00000503735 313 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 AC008638.1-201ENST00000506035 866 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 CBX3P3-201ENST00000508108 532 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 KRT19P6-201ENST00000510983 209 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.84□□□□□ -1.31
ERCC3P19447 AC116347.2-201ENST00000514912 523 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 HMGN2P36-201ENST00000529541 409 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.84□□□□□ -1.31
ERCC3P19447 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 AC079089.3-201ENST00000603094 673 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.84□□□□□ -1.31
ERCC3P19447 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC3P19447 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
ERCC3P19447 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.84□□□□□ -1.31
ERCC3P19447 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC3P19447 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
ERCC3P19447 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ERCC3P19447 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC3P19447 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC3P19447 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 AL079343.1-201ENST00000572358 1771 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ERCC3P19447 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 SNRPEP3-201ENST00000338402 276 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 RN7SKP160-201ENST00000363804 340 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 RNA5SP132-201ENST00000364725 118 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 DSTNP4-201ENST00000399472 474 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AF274854.1-201ENST00000413236 615 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 AC004448.2-201ENST00000422360 586 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AC005033.1-201ENST00000428904 813 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 RPL7P56-201ENST00000429441 717 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC3P19447 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 AL445928.1-201ENST00000435545 222 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 UBE2V1P3-201ENST00000439651 417 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 RPS7P3-201ENST00000443360 580 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 USP9YP29-201ENST00000445112 563 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC3P19447 MTCO1P48-201ENST00000448024 1096 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC3P19447 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC3P19447 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 RN7SL466P-201ENST00000497546 295 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 AC079140.3-201ENST00000511111 550 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 MTND5P4-201ENST00000514978 288 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 RNU6-150P-201ENST00000516237 95 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC3P19447 DEFB131D-201ENST00000526803 184 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.83□□□□□ -1.32
ERCC3P19447 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC3P19447 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 AC016180.1-201ENST00000567945 403 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AP001094.1-201ENST00000579805 193 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 MIR4505-201ENST00000582238 73 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 SNORD39.3-201ENST00000584451 71 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.83□□□□□ -1.32
ERCC3P19447 BNIP3P11-201ENST00000603878 563 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 FO393422.1-201ENST00000603908 708 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AC087752.4-201ENST00000605911 462 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC3P19447 AL691477.1-201ENST00000624398 162 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC3P19447 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC3P19447 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 AP000756.2-201ENST00000624168 2567 ntBASIC6.83□□□□□ -1.32
ERCC3P19447 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC3P19447 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms