Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.08□□□□□ -1.6
TOP1P11387 AL445567.2-201ENST00000618935 498 ntBASIC5.08□□□□□ -1.6
TOP1P11387 AL669942.2-201ENST00000620352 697 ntBASIC5.08□□□□□ -1.6
TOP1P11387 MIR7154-201ENST00000620673 73 ntBASIC5.08□□□□□ -1.6
TOP1P11387 AC015722.2-201ENST00000622210 551 ntBASIC5.08□□□□□ -1.6
TOP1P11387 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TOP1P11387 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
TOP1P11387 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TOP1P11387 PHKBP1-201ENST00000450951 1951 ntBASIC5.07□□□□□ -1.6
TOP1P11387 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 MIR365B-201ENST00000362317 111 ntBASIC5.07□□□□□ -1.6
TOP1P11387 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
TOP1P11387 ST13P16-201ENST00000401760 781 ntBASIC5.07□□□□□ -1.6
TOP1P11387 RN7SKP167-201ENST00000411047 285 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.07□□□□□ -1.6
TOP1P11387 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.07□□□□□ -1.6
TOP1P11387 AL512326.1-201ENST00000443050 721 ntBASIC5.07□□□□□ -1.6
TOP1P11387 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.07□□□□□ -1.6
TOP1P11387 EIF4A1P11-201ENST00000451239 222 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AC009963.2-201ENST00000453431 138 ntBASIC5.07□□□□□ -1.6
TOP1P11387 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 PPIAP21-201ENST00000464473 501 ntBASIC5.07□□□□□ -1.6
TOP1P11387 UQCRHP4-201ENST00000471686 272 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AC022336.1-201ENST00000475510 337 ntBASIC5.07□□□□□ -1.6
TOP1P11387 RN7SL691P-201ENST00000494487 301 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AC010374.1-201ENST00000503762 1237 ntBASIC5.07□□□□□ -1.6
TOP1P11387 PARP4P3-201ENST00000510265 317 ntBASIC5.07□□□□□ -1.6
TOP1P11387 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 IGLV3-26-201ENST00000520756 302 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AL352979.3-201ENST00000553515 247 ntBASIC5.07□□□□□ -1.6
TOP1P11387 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.07□□□□□ -1.6
TOP1P11387 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 AL121834.1-201ENST00000572284 509 ntBASIC5.07□□□□□ -1.6
TOP1P11387 ARF4P1-201ENST00000605447 541 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AL008729.2-201ENST00000606393 473 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AC019131.2-201ENST00000609071 870 ntBASIC5.07□□□□□ -1.6
TOP1P11387 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.07□□□□□ -1.6
TOP1P11387 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
TOP1P11387 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TOP1P11387 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP1P11387 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.07□□□□□ -1.6
TOP1P11387 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TOP1P11387 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TOP1P11387 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.06□□□□□ -1.6
TOP1P11387 LINC01109-201ENST00000603837 3081 ntBASIC5.06□□□□□ -1.6
TOP1P11387 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.06□□□□□ -1.6
TOP1P11387 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.06□□□□□ -1.6
TOP1P11387 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 RPS24P12-201ENST00000402084 394 ntBASIC5.06□□□□□ -1.6
TOP1P11387 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 MFSD13B-201ENST00000420133 1290 ntBASIC5.06□□□□□ -1.6
TOP1P11387 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.06□□□□□ -1.6
TOP1P11387 AL157831.1-201ENST00000426134 473 ntBASIC5.06□□□□□ -1.6
TOP1P11387 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.06□□□□□ -1.6
TOP1P11387 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.06□□□□□ -1.6
TOP1P11387 NUTF2P3-201ENST00000448540 384 ntBASIC5.06□□□□□ -1.6
TOP1P11387 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 RPL7AP52-201ENST00000458096 790 ntBASIC5.06□□□□□ -1.6
TOP1P11387 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 AC105137.1-201ENST00000484355 562 ntBASIC5.06□□□□□ -1.6
TOP1P11387 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.06□□□□□ -1.6
TOP1P11387 PRELID3BP5-201ENST00000508612 460 ntBASIC5.06□□□□□ -1.6
TOP1P11387 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 AC008958.1-201ENST00000511047 682 ntBASIC5.06□□□□□ -1.6
TOP1P11387 AC008694.2-201ENST00000517591 306 ntBASIC5.06□□□□□ -1.6
TOP1P11387 NPM1P6-201ENST00000521088 871 ntBASIC5.06□□□□□ -1.6
TOP1P11387 CYCSP29-201ENST00000533731 318 ntBASIC5.06□□□□□ -1.6
TOP1P11387 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 AC011477.5-201ENST00000586571 259 ntBASIC5.06□□□□□ -1.6
TOP1P11387 AP005212.4-201ENST00000614206 710 ntBASIC5.06□□□□□ -1.6
TOP1P11387 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.06□□□□□ -1.6
TOP1P11387 AC007546.1-201ENST00000619452 559 ntBASIC5.06□□□□□ -1.6
TOP1P11387 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.06□□□□□ -1.6
TOP1P11387 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 MAPK10-304ENST00000641341 3984 ntBASIC5.06□□□□□ -1.6
TOP1P11387 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.06□□□□□ -1.6
TOP1P11387 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP1P11387 AC007342.7-201ENST00000624610 2337 ntBASIC5.06□□□□□ -1.6
TOP1P11387 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.06□□□□□ -1.6
TOP1P11387 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms