Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AP000852.1-201ENST00000472460 573 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 ACTG1P13-201ENST00000486987 1043 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 RPL23AP40-201ENST00000487630 390 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC009120.1-201ENST00000493458 473 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC117522.3-201ENST00000507974 584 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AP005639.1-201ENST00000526939 192 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 OR8A2P-201ENST00000528631 952 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL354760.1-201ENST00000608357 643 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL592429.1-201ENST00000403909 1473 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL669831.5-218ENST00000591702 1873 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AL731556.1-201ENST00000394628 3711 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 AOX3P-204ENST00000491025 2107 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 UGT2B27P-201ENST00000505092 1620 ntBASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CSB-PGBD3P0DP91 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
CSB-PGBD3P0DP91 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
CSB-PGBD3P0DP91 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CSB-PGBD3P0DP91 GTF2IP4-201ENST00000453092 2054 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 ZNF658B-201ENST00000602828 3408 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 MTND5P26-201ENST00000426018 1752 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC008957.3-201ENST00000624112 2242 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC009804.1-201ENST00000400949 179 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AL357752.1-201ENST00000412817 349 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 OR51A3P-201ENST00000413596 924 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 BTF3P10-201ENST00000433415 495 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 UBE2V1P5-201ENST00000440070 405 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 SSXP1-201ENST00000453640 473 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 ACA64.4-201ENST00000459070 127 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC069439.1-201ENST00000494739 167 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 ATP1B1P1-201ENST00000509767 915 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC138832.1-201ENST00000522871 556 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 UBE2FP2-201ENST00000566646 462 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC015720.2-201ENST00000567709 334 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 BNIP3P9-201ENST00000603714 553 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 MIR6837-201ENST00000620884 64 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC019278.1-201ENST00000623516 479 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC025470.1-201ENST00000510053 2032 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AL161756.3-201ENST00000641216 2071 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 AC068733.2-201ENST00000605434 1418 ntBASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.77□□□□□ -1.17
CSB-PGBD3P0DP91 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 OR10J6P-201ENST00000289731 930 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 OR52E6-202ENST00000379946 954 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 RNU6-729P-201ENST00000384399 107 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AL161909.1-201ENST00000397390 712 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 RNU2-42P-201ENST00000410697 113 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC113412.1-201ENST00000425840 504 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms