Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 A2MP1-204ENST00000566278 4130 ntBASIC1.79□□□□□ -2.12
USH2AO75445 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC1.79□□□□□ -2.12
USH2AO75445 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 RPL7P22-201ENST00000466005 733 ntBASIC1.79□□□□□ -2.12
USH2AO75445 AL035404.1-201ENST00000497982 568 ntBASIC1.79□□□□□ -2.12
USH2AO75445 KRT19P6-201ENST00000510983 209 ntBASIC1.79□□□□□ -2.12
USH2AO75445 FCF1-203ENST00000553615 954 ntTSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 AC006077.1-201ENST00000604746 343 ntBASIC1.79□□□□□ -2.12
USH2AO75445 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 AC058791.1-201ENST00000608412 3198 ntBASIC1.79□□□□□ -2.12
USH2AO75445 ADAM5-202ENST00000399789 1942 ntBASIC1.79□□□□□ -2.12
USH2AO75445 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 RPS3AP6-201ENST00000484430 795 ntBASIC1.79□□□□□ -2.12
USH2AO75445 AC080014.1-201ENST00000496877 1201 ntBASIC1.79□□□□□ -2.12
USH2AO75445 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 CCT7-217ENST00000626868 249 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
USH2AO75445 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 SNORA48.8-201ENST00000391324 134 ntBASIC1.79□□□□□ -2.12
USH2AO75445 SNORA74C-2-201ENST00000411179 201 ntBASIC1.79□□□□□ -2.12
USH2AO75445 ISCA1P6-201ENST00000427740 390 ntBASIC1.79□□□□□ -2.12
USH2AO75445 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC1.79□□□□□ -2.12
USH2AO75445 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 APOA2-207ENST00000470459 416 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.79□□□□□ -2.12
USH2AO75445 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 AC119674.1-207ENST00000641355 633 ntBASIC1.79□□□□□ -2.12
USH2AO75445 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC1.79□□□□□ -2.12
USH2AO75445 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
USH2AO75445 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
USH2AO75445 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 FCF1P7-201ENST00000451185 558 ntBASIC1.78□□□□□ -2.12
USH2AO75445 AC105031.1-201ENST00000518550 476 ntBASIC1.78□□□□□ -2.12
USH2AO75445 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC1.78□□□□□ -2.12
USH2AO75445 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 AC005344.1-201ENST00000613391 459 ntBASIC1.78□□□□□ -2.12
USH2AO75445 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
USH2AO75445 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC1.78□□□□□ -2.12
USH2AO75445 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 AC107083.1-201ENST00000439643 279 ntBASIC1.78□□□□□ -2.12
USH2AO75445 AC005726.1-201ENST00000494679 427 ntBASIC1.78□□□□□ -2.12
USH2AO75445 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC1.78□□□□□ -2.12
USH2AO75445 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC1.78□□□□□ -2.12
USH2AO75445 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
USH2AO75445 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC1.78□□□□□ -2.12
USH2AO75445 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
USH2AO75445 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms