Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.83□□□□□ -1.64
LDB2O43679 DHX9P1-201ENST00000436565 3076 ntBASIC4.83□□□□□ -1.64
LDB2O43679 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LDB2O43679 RNU4-7P-201ENST00000364758 141 ntBASIC4.83□□□□□ -1.64
LDB2O43679 MIR513B-201ENST00000385136 84 ntBASIC4.83□□□□□ -1.64
LDB2O43679 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LDB2O43679 U3.30-201ENST00000391308 210 ntBASIC4.83□□□□□ -1.64
LDB2O43679 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 AL121878.1-201ENST00000418638 859 ntBASIC4.83□□□□□ -1.64
LDB2O43679 LINC00993-201ENST00000420453 540 ntBASIC4.83□□□□□ -1.64
LDB2O43679 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AL451139.1-201ENST00000434718 346 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.83□□□□□ -1.64
LDB2O43679 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.83□□□□□ -1.64
LDB2O43679 AC097499.1-201ENST00000444277 208 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AC092685.1-201ENST00000447960 1243 ntBASIC4.83□□□□□ -1.64
LDB2O43679 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.83□□□□□ -1.64
LDB2O43679 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.83□□□□□ -1.64
LDB2O43679 AC069304.1-201ENST00000491593 704 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AC020890.1-201ENST00000491837 504 ntBASIC4.83□□□□□ -1.64
LDB2O43679 CDH12P4-201ENST00000517835 295 ntBASIC4.83□□□□□ -1.64
LDB2O43679 CDH12P3-201ENST00000517935 295 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.83□□□□□ -1.64
LDB2O43679 CDH12P1-201ENST00000518435 295 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.83□□□□□ -1.64
LDB2O43679 NDUFS5P6-201ENST00000529136 295 ntBASIC4.83□□□□□ -1.64
LDB2O43679 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.83□□□□□ -1.64
LDB2O43679 AC087477.6-201ENST00000559595 843 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AL109741.3-201ENST00000561748 592 ntBASIC4.83□□□□□ -1.64
LDB2O43679 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.83□□□□□ -1.64
LDB2O43679 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.83□□□□□ -1.64
LDB2O43679 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.83□□□□□ -1.64
LDB2O43679 AC004223.2-201ENST00000590309 544 ntBASIC4.83□□□□□ -1.64
LDB2O43679 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.83□□□□□ -1.64
LDB2O43679 AC005084.1-201ENST00000605160 304 ntBASIC4.83□□□□□ -1.64
LDB2O43679 OR2BH1P-201ENST00000608850 864 ntBASIC4.83□□□□□ -1.64
LDB2O43679 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.83□□□□□ -1.64
LDB2O43679 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
LDB2O43679 AC231759.1-201ENST00000616455 597 ntBASIC4.83□□□□□ -1.64
LDB2O43679 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.83□□□□□ -1.64
LDB2O43679 AC006840.1-201ENST00000623069 542 ntBASIC4.83□□□□□ -1.64
LDB2O43679 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LDB2O43679 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
LDB2O43679 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.83□□□□□ -1.64
LDB2O43679 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LDB2O43679 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LDB2O43679 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LDB2O43679 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LDB2O43679 ARL4AP5-201ENST00000404372 599 ntBASIC4.82□□□□□ -1.64
LDB2O43679 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.82□□□□□ -1.64
LDB2O43679 AC092638.1-201ENST00000411966 1275 ntBASIC4.82□□□□□ -1.64
LDB2O43679 HMGB3P31-201ENST00000413333 595 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AC114755.2-201ENST00000413520 361 ntBASIC4.82□□□□□ -1.64
LDB2O43679 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.82□□□□□ -1.64
LDB2O43679 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.82□□□□□ -1.64
LDB2O43679 MTND4P3-201ENST00000417829 541 ntBASIC4.82□□□□□ -1.64
LDB2O43679 KRR1P1-201ENST00000419430 803 ntBASIC4.82□□□□□ -1.64
LDB2O43679 OR2X1P-201ENST00000421144 687 ntBASIC4.82□□□□□ -1.64
LDB2O43679 FO393419.3-201ENST00000428741 282 ntBASIC4.82□□□□□ -1.64
LDB2O43679 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LDB2O43679 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.82□□□□□ -1.64
LDB2O43679 YWHAZP2-201ENST00000440317 728 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AC234781.3-201ENST00000452540 973 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AURKAPS2-201ENST00000454983 333 ntBASIC4.82□□□□□ -1.64
LDB2O43679 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.82□□□□□ -1.64
LDB2O43679 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.82□□□□□ -1.64
LDB2O43679 NAP1L1P3-201ENST00000462291 880 ntBASIC4.82□□□□□ -1.64
LDB2O43679 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 AC079203.1-201ENST00000487972 404 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.82□□□□□ -1.64
LDB2O43679 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.82□□□□□ -1.64
LDB2O43679 HIGD1AP18-201ENST00000520730 278 ntBASIC4.82□□□□□ -1.64
LDB2O43679 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.82□□□□□ -1.64
LDB2O43679 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.82□□□□□ -1.64
LDB2O43679 AC104417.1-201ENST00000523974 751 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.82□□□□□ -1.64
LDB2O43679 AC021006.3-201ENST00000530771 192 ntBASIC4.82□□□□□ -1.64
LDB2O43679 FKBP1BP1-201ENST00000553366 325 ntBASIC4.82□□□□□ -1.64
LDB2O43679 EDDM3DP-201ENST00000554692 434 ntBASIC4.82□□□□□ -1.64
LDB2O43679 AC009097.3-201ENST00000563557 1018 ntBASIC4.82□□□□□ -1.64
LDB2O43679 MTND3P13-201ENST00000574391 343 ntBASIC4.82□□□□□ -1.64
LDB2O43679 RN7SL802P-201ENST00000577858 299 ntBASIC4.82□□□□□ -1.64
LDB2O43679 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.82□□□□□ -1.64
LDB2O43679 AC022726.1-201ENST00000587475 207 ntBASIC4.82□□□□□ -1.64
LDB2O43679 BNIP3P24-201ENST00000593398 557 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms