Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC112187.2-201ENST00000604345 283 ntBASIC6.48□□□□□ -1.37
SOX1O00570 AL442067.2-201ENST00000614033 363 ntBASIC6.48□□□□□ -1.37
SOX1O00570 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 CCT8P1-201ENST00000413611 1657 ntBASIC6.48□□□□□ -1.37
SOX1O00570 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SOX1O00570 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SOX1O00570 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SOX1O00570 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX1O00570 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX1O00570 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 Y_RNA.97-201ENST00000363094 102 ntBASIC6.47□□□□□ -1.37
SOX1O00570 Y_RNA.279-201ENST00000364763 95 ntBASIC6.47□□□□□ -1.37
SOX1O00570 Y_RNA.460-201ENST00000384255 102 ntBASIC6.47□□□□□ -1.37
SOX1O00570 Y_RNA.529-201ENST00000384586 119 ntBASIC6.47□□□□□ -1.37
SOX1O00570 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 ZNF90P2-204ENST00000419323 1075 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX1O00570 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX1O00570 RPL7P56-201ENST00000429441 717 ntBASIC6.47□□□□□ -1.37
SOX1O00570 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX1O00570 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX1O00570 NPM1P39-201ENST00000449818 867 ntBASIC6.47□□□□□ -1.37
SOX1O00570 OR6K1P-201ENST00000456766 971 ntBASIC6.47□□□□□ -1.37
SOX1O00570 RPL5P22-201ENST00000480199 884 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AC091544.1-201ENST00000484702 348 ntBASIC6.47□□□□□ -1.37
SOX1O00570 RPS21P4-201ENST00000487122 248 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AC021678.1-201ENST00000505195 936 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX1O00570 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX1O00570 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.47□□□□□ -1.37
SOX1O00570 RNU6-1261P-201ENST00000517194 104 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AC138832.1-201ENST00000522871 556 ntBASIC6.47□□□□□ -1.37
SOX1O00570 FAM92A1P1-201ENST00000528023 890 ntBASIC6.47□□□□□ -1.37
SOX1O00570 CBX3P5-201ENST00000552017 521 ntBASIC6.47□□□□□ -1.37
SOX1O00570 TRAV15-201ENST00000556680 249 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX1O00570 MIR4637-201ENST00000582405 84 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AC073091.2-201ENST00000603205 907 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AC091488.1-201ENST00000604239 660 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AL008723.3-201ENST00000608926 449 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX1O00570 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
SOX1O00570 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.47□□□□□ -1.37
SOX1O00570 AC183089.2-201ENST00000637931 916 ntBASIC6.47□□□□□ -1.37
SOX1O00570 AC073869.10-201ENST00000642016 354 ntBASIC6.47□□□□□ -1.37
SOX1O00570 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SOX1O00570 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SOX1O00570 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SOX1O00570 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SOX1O00570 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX1O00570 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX1O00570 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX1O00570 AC006213.6-201ENST00000623722 4179 ntBASIC6.47□□□□□ -1.37
SOX1O00570 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX1O00570 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SOX1O00570 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX1O00570 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.37
SOX1O00570 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.46□□□□□ -1.37
SOX1O00570 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX1O00570 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
SOX1O00570 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SOX1O00570 HSPA8P17-201ENST00000427029 1382 ntBASIC6.46□□□□□ -1.37
SOX1O00570 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
SOX1O00570 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
SOX1O00570 CASC19-228ENST00000641414 1684 ntBASIC6.46□□□□□ -1.37
SOX1O00570 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX1O00570 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SOX1O00570 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX1O00570 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SOX1O00570 RNU6-492P-201ENST00000363035 104 ntBASIC6.46□□□□□ -1.38
SOX1O00570 DBF4P1-201ENST00000412976 1892 ntBASIC6.46□□□□□ -1.38
SOX1O00570 RPS3AP9-201ENST00000417027 792 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms