Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TMEM88BA6NKF7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TMEM88BA6NKF7 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TMEM88BA6NKF7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
TMEM88BA6NKF7 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TMEM88BA6NKF7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
TMEM88BA6NKF7 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 USP9YP4-201ENST00000424401 1745 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC006378.2-201ENST00000623178 2476 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MFSD8-217ENST00000641178 4374 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 RNU1-85P-201ENST00000364127 164 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 RNU6-657P-201ENST00000383904 107 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 RNU6-533P-201ENST00000384144 107 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AL360271.1-201ENST00000395679 510 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MIR1277-201ENST00000408536 78 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 RPS3AP3-201ENST00000411933 242 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 C1DP2-201ENST00000418167 426 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 RPS15AP30-201ENST00000420976 390 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 ZNF863P-201ENST00000426746 417 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AL590365.1-201ENST00000450788 243 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC099563.1-201ENST00000456086 418 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC112204.1-201ENST00000502591 103 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 CBX3P7-201ENST00000532876 502 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AL133338.2-201ENST00000604292 736 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC141002.1-201ENST00000607025 279 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC097468.3-201ENST00000607956 456 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC005609.4-201ENST00000625071 447 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.04□□□□□ -1.28
TMEM88BA6NKF7 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 MAPK10-287ENST00000641217 3037 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 AC097461.1-201ENST00000568928 2821 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 Y_RNA.554-201ENST00000384672 102 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 SNORD115-47-201ENST00000391226 86 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 FCF1P10-201ENST00000407590 479 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 METTL15P3-201ENST00000415522 1221 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 RPL7P30-201ENST00000420888 709 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 MTCO3P18-201ENST00000440206 761 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 FHP1-201ENST00000442741 703 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 ACTR3P3-201ENST00000480448 893 ntBASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TMEM88BA6NKF7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms